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OR_07232018_dam_0_1um_scaffold_540_4

Organism: OR_07232018_dam_0_1um_Halothiobacillus_54_56

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(3618..4436)

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 271.0
  • Bit_score: 376
  • Evalue 3.80e-102
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 271.0
  • Bit_score: 376
  • Evalue 1.90e-101
Formamidopyrimidine-DNA glycosylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVL5_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 271.0
  • Bit_score: 376
  • Evalue 1.40e-101

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGCCAGAGTTGCCTGAAGTAGAAACAACCCGCCGGGGTATTGAGCCGCATGTGTTGGGTCTGCGCATTCATACGGCGGTCGTTCACGACCCGAGGCTGCGTTGGCCGGTTCGGCCTGATTTGCCCGAATGGCTGGCTAATCGCCGCATTGAAGCCGTTGAGCGGCGTTCAAAATACTTGCAGCTTCGCTTTGAAAACGATGAGCGGTTATTAATTCACTTGGGCATGTCGGGCTGTTTGCGGCTGGTGGCGCCGGGCACGCCAAAGAAAAAGCACGATCATGTTGACATTTCGTTTGAAAATGGCACTAGCTTGCGGTATCATGACCCACGGCGGTTTGGCGCTTTGCTCACCGATCACACGGCAATGCCCCATGCGCGATTGCTTGGTTTGGGGCCTGAGCCTTTAACCGATGATTTTTCTGCCGATTACCTTTGCACGGCACTCGGCCGGCGCAAAACGCCCATTAAGCCGTTATTAATGAATGCGGCCATCGTGGTGGGCGTGGGAAATATCTACGCGAATGAAGCGGGGTTTTTAGCGCAGATTCATCCGATGCGGCCGGCAAATTCGCTGAATCCTGCCGAAGTGGCTCGGCTGGTTGCCGTTATTAAAGATGTGTTAACGCGTGCGATTGAGCAAGGCGGCACCACATTGCGTGATTTTGTTCGAGAAGACGGGCAGCCGGGGTATTTTAAGCAAACCTTGGCGGTGTATGACCGAGGCGGCGCCCCTTGCCTGCTTTGTGGCACGCCCATTGTGCGTTGCGTTCAGGCGCAGCGGGCGACCTATTTTTGCTCGGTCTGTCAGCCAATTTAA
PROTEIN sequence
Length: 273
MPELPEVETTRRGIEPHVLGLRIHTAVVHDPRLRWPVRPDLPEWLANRRIEAVERRSKYLQLRFENDERLLIHLGMSGCLRLVAPGTPKKKHDHVDISFENGTSLRYHDPRRFGALLTDHTAMPHARLLGLGPEPLTDDFSADYLCTALGRRKTPIKPLLMNAAIVVGVGNIYANEAGFLAQIHPMRPANSLNPAEVARLVAVIKDVLTRAIEQGGTTLRDFVREDGQPGYFKQTLAVYDRGGAPCLLCGTPIVRCVQAQRATYFCSVCQPI*