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OR_07232018_dam_0_1um_scaffold_3980_1

Organism: OR_07232018_dam_0_1um_Halothiobacillus_54_56

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(2..3100)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 1033.0
  • Bit_score: 1894
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXG6_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 1033.0
  • Bit_score: 1894
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 1033.0
  • Bit_score: 1894
  • Evalue 0.0

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3099
CGCGCGGTAACGGGGACAAACAAGCGTCCGTTGAAATCGCTCGCCGACATGATTAAAGGCAAGCAAGGCCGGTTCCGCCAAAACTTGCTCGGCAAACGGGTCGATTACTCGGGGCGTTCGGTCATCGTGGTGGGGCCAACCTTGCGCCTGCACCAATGCGGCCTGCCAAAGAAAATGGCTCTGGAACTCTTCAAACCGTTTATTTTCGGCAAGCTCCATCGTCGGGGTTTAGCGACCACGATTAAAGCGGCCAAGAAACTCGTTGAGCGCGAAGGCCCTGAGGTTTGGGATGTGCTCGAAGAAGTGATTCGCGAGCATCCGGTGTTATTGAACCGCGCGCCTACCTTGCACCGTTTGGGTATCCAAGCATTTGAACCGATTTTGATTGAAGGTAAGGCAATTCAACTGCACCCCTTGGTCTGCTCCTCGTATAACGCGGACTTTGACGGTGACCAGATGGCCGTGCATGTGCCCCTGTCATTGGAAGCGCAAGCCGAAGCCCGCACCTTGATGATGTCGACCAATAACGTGCTGTCACCGGCTAACGGTGATCCGGTCATTGTGCCGTCGCAAGATATTGTGCTTGGTATTTATTACATGACCCGCGCCAAAATTAATGGCCGGGGCGAGGGTATGGTGTTCGCTGACCTCGATGAAGTGCAGCGCGCCTACGATAACCATCAAGCTGAAATTGGCGCGATGATTAAAGTCCGCGTCAATGATTGGATTCGCCACGATGATGGCCGCGCTGAATCCGTTCGCCAAATTGTTGAAACAACGGTAGGCCGTGCGCTGTTATTTCGCACCTTGCCCGTTGGCGTGCCTTTTGCACAAATCAACAAGGATATGGGCAAAAAGGCGATTTCTGCCTTGTTGAACTACGTGTATCGCCAGTTGGGCTTGAAAGATACCGTGCTGTTTGCCGATCAAATGATGTACACCGGGTTTCGCTTTGCCACCCGTTCGGGTATTTCTATTTGCTCCGATGACATGCTGGTACCGCCGTCAAAGCCGGCCGAATTGGCCAAGGCCGAGGCCGAGGTTCAAGAGATTCAAACTCAGTACTCACAAGGCTTGGTCACTGAAAAAGAGCGCTACAACAAAGTGGTGGATATTTGGTCGCGCGCGAATGACCAAATTTCACGTGCCATGATGGAGCAGCTCGGTTCAGAGAAAGTCGTGGATCGTCACGGCGAAACGGTTAAGCAAAGCTCGTTTAACGCGATTTTTATGATGGCCGATTCTGGTGCTCGGGGTTCGGCGGCGCAAATTCGCCAATTGGCGGGTATGCGCGGCCTAATGGCCAAGCCCGATGGTTCAATTATCGAAACACCGATCACGGCAAACTTCCGTGAAGGCTTGAACGTACTTCAGTACTTCATCTCCACCCACGGGGCGCGTAAAGGTTTGGCCGATACGGCACTGAAAACGGCTAACTCAGGGTACCTAACCCGCCGTTTAGTCGATGTGGCGCAAGATTTGGTTGTCACCATTGAAGATTGCGGCACCACGGCGCCGGGCTTGAAGGTTACGGCGGTTATTGAAGGCGGGGATGTGGTACAAGGCTTAGGCGCGCGCATTCTTGGCCGCACGACCTCGCAGGATGTGCTCAAACCCGGTTCAAACGATGTGTTGGTTCAAACGGGCACCATTCTTAATGAGTTAATGGTATTGCGTCTCGAAGAAGCCGGTGTCGATGAGGTTTGGGTTCGCTCGCCAATTGGCTGCGAAGCCCGCCACGGCATCTGCCAAAAATGCTATGGCCGCGATCTTGCCCGAGGCAAAATCGTTAACATTGGTGAAGCGGTTGGCGTTATCGCCGCGCAATCTATCGGTGAGCCAGGCACGCAGCTTACGATGCGTACCTTCCATATCGGGGGTGCGGCTTCGCGGTCGGCCGCCATTAGCTCGGTGCAAAATAAAGCCGCCGGCCTTGTCCGTCTGCATAACCTTAAAACGGTAGTTAACCGAGATAACGATCTTGTGGCTGTAACCCGCTCGGGTGAGCTTGGTATGGTCGATGATCAGGGGCGTGAGCGCGAACGCTACAAAGTGCCTTATGGTGCGGTTATTCGTGTTAAAGAGGGCGATAAAGTCGCTGCGGGCACAACGCTTGCCAGCTGGGATCCGCACACCCACCCGGTGGTTAGTGAAATGCAGGGGCAGGCGCGCTTCTCTGATTTTGCCGATGGTTTGTCGGTTAAATTAGAAACCGATGAGATTACGGGGCTGTCGGCTTTGATCATTATTGATCCCAAACACCGCAGCACCGCCGCAGCCAAAGAAATGCGCCCTGCGATTTCTCTGGTGGATGAATTAGGGAACCCCATTTGCTTGGTGGGTACCGAGATTCCTGCGTTTTACGTCTTGCCTGCCGGTGCCATTATTGGGATTGAAGATGGCGCCACGGTTCAGGTAGGCGACATCATTGCGCGTATTCCACAAGAATCTTCGAAAACGCGTGATATTACGGGTGGTTTGCCTCGGGTTGCGGATTTGTTTGAAGCCCGCAAGCCCAAAGAGCCGGCTATTTTGGCGGAATACACGGGCACCATTAGTTTTGGTAAAGAAACCAAAGGCAAGCAACGCCTGGTGATTACCGATGAACATGGCGAAGCGCACGAAGAGTTGATTCCGAAGTATCGGGTCATTAACGTCTTCGAAGGCGAGCATGTGGCGCGCGGCGAGGTCATCGCCGATGGCGAGCTGACCCCGCATGATATTTTGCGTTTACGCGGCATTCCCGATTTGGCGGCCTATATCATCAAAGAAATCCAAGATGTTTACCGTCTGCAAGGGGTAATCATCAGTGATAAGCACATTGAAGTGATCGTGCGCCAGATGCTGCGTAAGGTCGAGATTTCAGATACAGGGGATTCGGGTTATCTTCGGGGAGATCAGGTCGATAAAGCACGCTTGCTGGAAGAGAATCGCAATCTTGAGCAGGCTGGCAAGTTCGCCGCCAAGTTTGAACCCATGCTGCTGGGTATTACCAAGGCCTCCTTGGTGACCGAGTCATTTATTTCAGCGGCTTCCTTCCAAGAAACCACCCGCGTGCTGACGGATTCATCGACACGCGGTGCGCGCGATGAATTACGC
PROTEIN sequence
Length: 1033
RAVTGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFGKLHRRGLATTIKAAKKLVEREGPEVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSSYNADFDGDQMAVHVPLSLEAQAEARTLMMSTNNVLSPANGDPVIVPSQDIVLGIYYMTRAKINGRGEGMVFADLDEVQRAYDNHQAEIGAMIKVRVNDWIRHDDGRAESVRQIVETTVGRALLFRTLPVGVPFAQINKDMGKKAISALLNYVYRQLGLKDTVLFADQMMYTGFRFATRSGISICSDDMLVPPSKPAELAKAEAEVQEIQTQYSQGLVTEKERYNKVVDIWSRANDQISRAMMEQLGSEKVVDRHGETVKQSSFNAIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTIEDCGTTAPGLKVTAVIEGGDVVQGLGARILGRTTSQDVLKPGSNDVLVQTGTILNELMVLRLEEAGVDEVWVRSPIGCEARHGICQKCYGRDLARGKIVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAISSVQNKAAGLVRLHNLKTVVNRDNDLVAVTRSGELGMVDDQGRERERYKVPYGAVIRVKEGDKVAAGTTLASWDPHTHPVVSEMQGQARFSDFADGLSVKLETDEITGLSALIIIDPKHRSTAAAKEMRPAISLVDELGNPICLVGTEIPAFYVLPAGAIIGIEDGATVQVGDIIARIPQESSKTRDITGGLPRVADLFEARKPKEPAILAEYTGTISFGKETKGKQRLVITDEHGEAHEELIPKYRVINVFEGEHVARGEVIADGELTPHDILRLRGIPDLAAYIIKEIQDVYRLQGVIISDKHIEVIVRQMLRKVEISDTGDSGYLRGDQVDKARLLEENRNLEQAGKFAAKFEPMLLGITKASLVTESFISAASFQETTRVLTDSSTRGARDELR