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OR_07232018_dam_0_1um_scaffold_2417_2

Organism: OR_07232018_dam_0_1um_Halothiobacillus_54_56

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(1507..2259)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYA1_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 250.0
  • Bit_score: 456
  • Evalue 1.60e-125
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 250.0
  • Bit_score: 456
  • Evalue 4.60e-126
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 250.0
  • Bit_score: 456
  • Evalue 2.30e-125

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
TTGGCCGAACAGCTCAAAAGCACGGGTGATATCAACGCAGCGCAAGCGCTCATCATGGCGCATCTGCGCTTTGTGGTGCATATTGCCCGTGGCTATCGCGGCTATGGTTTGCCGCTCTCTGATCTAATTCAAGAAGGCAACATCGGCCTAATGAAAGCAGTAAAACGCTTTGAGCCAGAGCAAAAAGTACGCCTGGTTACCTTTGCCGTACATTGGATTCGGGCAGAAATCCATGAATATATTCTGAAAAACTGGCGCATTGTGAAAATTGCCACCACCAAAGCGCAACGCAAACTCTTTTTCAAAATGCGGCAGATGAAAAATGGCTTAGGCTGGCTCACCGCCGAAGAAACCCGCGCCATTGCCGCCGAGTTAAATGTGCCTGAACGCGAAGTGGCCACCATGGAATCACGCCTTTATAGTCATGATGTGGCCATTGATGCCCCACTGTATGAAAACGATTCAGAAGGGAGTGGCCCCTCCTACGAGCAAATTCTGGTTGATCAGCATCAAGTGTCTGTTGAAGACATGACCGCCCAGCGCGATGAAGATGATCGGTTAAGCGCCATGAGCCACGCACTCACCGCTCTGGATGCGCGCAGCCGCGATATTTTAGAGCGCCGCTGGCTGGCAGAACCCAAAGCCACGCTCCAAACGCTGGCCGATGAATACCAAGTATCGGCTGAACGGGTACGCCAAATTGAAAATGCCGCCCTTAAAAAGCTCAAAATGGCATTACCCGCGCCGGAATAA
PROTEIN sequence
Length: 251
LAEQLKSTGDINAAQALIMAHLRFVVHIARGYRGYGLPLSDLIQEGNIGLMKAVKRFEPEQKVRLVTFAVHWIRAEIHEYILKNWRIVKIATTKAQRKLFFKMRQMKNGLGWLTAEETRAIAAELNVPEREVATMESRLYSHDVAIDAPLYENDSEGSGPSYEQILVDQHQVSVEDMTAQRDEDDRLSAMSHALTALDARSRDILERRWLAEPKATLQTLADEYQVSAERVRQIENAALKKLKMALPAPE*