ggKbase home page

OR_07232018_dam_0_1um_scaffold_8334_4

Organism: OR_07232018_dam_0_1um_Halothiobacillus_54_56

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 3136..3861

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Csn1 family (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZRV1_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 203.0
  • Bit_score: 243
  • Evalue 1.20e-61
Uncharacterized protein {ECO:0000313|EMBL:AKH21524.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 246.0
  • Bit_score: 289
  • Evalue 2.70e-75
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 237.0
  • Bit_score: 193
  • Evalue 5.40e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sedimenticola sp. SIP-G1 → Sedimenticola → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAAAGCAGGCGGCTGGCGCACCATGGGGGAAATGGCGGCGCGTGATGACGAGTTTGCCCATGCCAAACGCAACAAGGGCGGAGCCTATACGCACACCTTTGCCCGAGCCGACCTTGAAGACGAATTGCGCGAGCTTTTTGCCGCGCAACGCCAGCATGCCAACGCCCACAGCGCGCCCGAGTTTGAAGCCGCCGTGCATGAGCTTCTCATGGCGCGCAAACCCACGCTTTCTGGTGAAAACCTGCTCAAAATGGTCGGCAAATGCACCTTTGAGCCGAGCGAATACCGCGCCCCCAAAGCCAGCCACACCGCCGAACGCTTTGTCTGGCTCACCCGCCTCAACAACACCCGCATTACCGGGCTGGGCATCACTCGTTTACTATCCGATGATGAGCGGCTCGCCTTAATTAACCTGCCCTTCACCCAAGCCAAACTCACCTACAAACAAGCGCGCAAAGCGGCCAACCTGGCGGAGCAAGAGCGCTTTATCGGCCTGGCCTATCGCGCCGACAAAGACCCCGAAAGCGCGGTGCTATTCGAGGCCAAAGCCTTTCACAAACTGCGTAAAGCCTATGAAGACGCGGGACTGAAAACCGAATGGGCGCGTGATGCGGTCAACCCCGAACGCTTGGACACCCTCGCCTTCGCGCAAACCGCCTACAAAGACGACCGCGAAGCGCGGGAGTTTCTCGCAAAACAAAGCGTTGAACCCGCCATTATCGAG
PROTEIN sequence
Length: 242
MKAGGWRTMGEMAARDDEFAHAKRNKGGAYTHTFARADLEDELRELFAAQRQHANAHSAPEFEAAVHELLMARKPTLSGENLLKMVGKCTFEPSEYRAPKASHTAERFVWLTRLNNTRITGLGITRLLSDDERLALINLPFTQAKLTYKQARKAANLAEQERFIGLAYRADKDPESAVLFEAKAFHKLRKAYEDAGLKTEWARDAVNPERLDTLAFAQTAYKDDREAREFLAKQSVEPAIIE