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OR_08082017_2m_0_2um_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08082017_2m_0_2um_scaffold_276_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..242
-----------------
DNA (240bp)
protein (80aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX97_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95111.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_2
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248..538
-----------------
DNA (291bp)
protein (97aa)
DNA polymerase subunit beta n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1G8_9GAMM
DNA polymerase III subunit beta
DNA polymerase III subunit beta {ECO:0000313|EMBL:AHK79441.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
OR_08082017_2m_0_2um_scaffold_276_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

585..1985
-----------------
DNA (1401bp)
protein (467aa)
Putative Polysaccharide biosynthesis protein n=1 Tax=mine drainage metagenome RepID=E6PM30_9ZZZZ
Putative Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDH45678.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
rfbE; O-antigen and teichoic acid export membrane protein
OR_08082017_2m_0_2um_scaffold_276_4

Not on your lists

2054..2287
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PM28_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95980.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prevent-host-death family protein
OR_08082017_2m_0_2um_scaffold_276_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2284..2676
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003750060
Uncharacterized protein {ECO:0000313|EMBL:CDH43617.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
twitching motility protein PilT
OR_08082017_2m_0_2um_scaffold_276_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2749..3666
-----------------
DNA (918bp)
protein (306aa)
Putative Methylase involved in ubiquinone/menaquinone biosynthesis-like n=1 Tax=mine drainage metagenome RepID=E6QEK4_9ZZZZ
Putative Methylase involved in ubiquinone/menaquinone biosynthesis-like {ECO:0000313|EMBL:CDH45676.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
OR_08082017_2m_0_2um_scaffold_276_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3817..4842)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2R3_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL22708.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
OR_08082017_2m_0_2um_scaffold_276_8
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4839..5786)
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2R4_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL22709.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
OR_08082017_2m_0_2um_scaffold_276_9
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5779..6903)
-----------------
DNA (1125bp)
protein (375aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2R5_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL22710.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
OR_08082017_2m_0_2um_scaffold_276_10
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6959..7366)
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39W24_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB31550.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
OR_08082017_2m_0_2um_scaffold_276_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7356..7739)
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000382B3DC
hypothetical protein
Tax=CG_Rhodof_02
OR_08082017_2m_0_2um_scaffold_276_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7856..8905)
-----------------
DNA (1050bp)
protein (350aa)
Nucleotide sugar dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX81_HALNC
nucleotide sugar dehydrogenase
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ACX95095.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8928..9632)
-----------------
DNA (705bp)
protein (235aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX80_HALNC
monofunctional biosynthetic peptidoglycan transglycosylase
OR_08082017_2m_0_2um_scaffold_276_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9749..10243)
-----------------
DNA (495bp)
protein (165aa)
Fimbrial protein pilin n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX79_HALNC
fimbrial protein pilin
Fimbrial protein pilin {ECO:0000313|EMBL:ACX95093.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10409..11098)
-----------------
DNA (690bp)
protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Lipoprotein releasing system, ATP-binding protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX74_HALNC
lipoprotein releasing system, ATP-binding protein
OR_08082017_2m_0_2um_scaffold_276_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11091..12338)
-----------------
DNA (1248bp)
protein (416aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX73_HALNC
lipoprotein releasing system transmembrane protein LolC/E family
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:ACX95087.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12890..13234
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX72_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95086.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13295..13495
-----------------
DNA (201bp)
protein (67aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX71_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95085.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13505..14560
-----------------
DNA (1056bp)
protein (352aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX70_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95084.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14616..15179)
-----------------
DNA (564bp)
protein (188aa)
Putative type-4 fimbrial pilin related signal peptide protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVW0_HALNC
type-4 fimbrial pilin related signal peptide protein
Putative type-4 fimbrial pilin related signal peptide protein {ECO:0000313|EMBL:ACX94887.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15574..15951)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SAS8_ACIJO
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08082017_2m_0_2um_scaffold_276_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16138..16620)
-----------------
DNA (483bp)
protein (161aa)
PilE protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVV9_HALNC
PilE protein
PilE protein {ECO:0000313|EMBL:ACX94886.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_23
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16632..20477)
-----------------
DNA (3846bp)
protein (1282aa)
Putative Tfp pilus assembly protein, tip-associated adhesin PilY1 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE1_THIA3
putative Tfp pilus assembly protein, tip-associated adhesin PilY1
Putative Tfp pilus assembly protein, tip-associated adhesin PilY1 {ECO:0000313|EMBL:CAZ87182.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_08082017_2m_0_2um_scaffold_276_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20504..21124)
-----------------
DNA (621bp)
protein (207aa)
Putative Tfp pilus assembly protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM65_9GAMM
Putative Tfp pilus assembly protein {ECO:0000313|EMBL:EIM00557.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Tfp pilus assembly protein PilX
OR_08082017_2m_0_2um_scaffold_276_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21126..22151)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM64_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00556.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
OR_08082017_2m_0_2um_scaffold_276_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22148..22612)
-----------------
DNA (465bp)
protein (155aa)
Type IV pilus modification protein PilV n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVV5_HALNC
type IV pilus modification protein PilV
Type IV pilus modification protein PilV {ECO:0000313|EMBL:ACX94882.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22596..23171)
-----------------
DNA (576bp)
protein (192aa)
Tfp pilus assembly protein FimT-like protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVV4_HALNC
Tfp pilus assembly protein FimT-like protein
Tfp pilus assembly protein FimT-like protein {ECO:0000313|EMBL:ACX94881.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23317..25836)
-----------------
DNA (2520bp)
protein (840aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVU7_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX94874.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_29
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25827..26552)
-----------------
DNA (726bp)
protein (242aa)
ABC transporter related protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVU8_HALNC
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACX94875.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_276_30
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26557..27273
-----------------
DNA (717bp)
protein (239aa)
arylesterase (EC:3.1.1.2)
Arylesterase {ECO:0000313|EMBL:ACX94876.1}; EC=3.1.1.2 {ECO:0000313|EMBL:ACX94876.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Arylesterase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVU9_HALNC
Displaying items 1-30 of 57 in total

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