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B_1_S1_Biohub_coassembly_Chloroflexi_60_123

B_1_S1_Biohub_coassembly_Bacteria_60_123
In projects: GD2017-1_B1_S1_Biohub_coassembly  |  genasci-metabolism  |  all_nc_groundwater_genomes

Consensus taxonomy: Bacteria

Taxonomy override: Chloroflexi

Description

GD17-1_B1_coassembly_Maxbin2_Maxbin2_Maxbin2_Maxbin2_068_IF

Displaying items 1-50 of 107 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
B_1_S1_Biohub_coassembly_k141_1227482
Domain: Bacteria (78.88%)
322 358943 bp 59.53 121.07 87.70
B_1_S1_Biohub_coassembly_k141_5545070
Domain: Bacteria (85.37%)
287 350501 bp 58.95 119.88 90.16
B_1_S1_Biohub_coassembly_k141_3447093
Domain: Bacteria (81.88%)
149 158528 bp 59.50 119.41 84.71
B_1_S1_Biohub_coassembly_k141_2422068
Domain: Bacteria (81.51%)
146 137677 bp 59.36 121.35 88.01
B_1_S1_Biohub_coassembly_k141_1457868
Domain: Bacteria (73.72%)
137 148589 bp 61.03 124.23 85.23
B_1_S1_Biohub_coassembly_k141_5043925
Phylum: Chloroflexi (53.39%)
118 115512 bp 60.23 120.28 89.86
B_1_S1_Biohub_coassembly_k141_4455598
Domain: Bacteria (72.81%)
114 109676 bp 60.42 125.53 81.86
B_1_S1_Biohub_coassembly_k141_791611
Domain: Bacteria (84.38%)
96 114960 bp 60.25 119.85 84.85
B_1_S1_Biohub_coassembly_k141_2724959
Domain: Bacteria (79.55%)
88 98789 bp 60.55 123.22 86.85
B_1_S1_Biohub_coassembly_k141_4754286
Domain: Bacteria (88.51%)
87 95361 bp 59.80 119.32 86.28
B_1_S1_Biohub_coassembly_k141_1242614
Domain: Bacteria (90.24%)
82 103733 bp 60.05 124.24 89.05
B_1_S1_Biohub_coassembly_k141_2265495
Domain: Bacteria (81.71%)
82 81707 bp 61.35 125.41 83.51
B_1_S1_Biohub_coassembly_k141_1231280
Domain: Bacteria (77.78%)
81 90132 bp 60.76 125.83 85.20
B_1_S1_Biohub_coassembly_k141_3415540
Domain: Bacteria (78.48%)
79 83340 bp 60.24 121.25 88.29
B_1_S1_Biohub_coassembly_k141_2039212
Domain: Bacteria (89.19%)
74 100740 bp 59.02 125.68 89.88
B_1_S1_Biohub_coassembly_k141_2307213
Phylum: Chloroflexi (50.68%)
73 75207 bp 59.51 126.58 86.00
B_1_S1_Biohub_coassembly_k141_4488169
Domain: Bacteria (76.71%)
73 72985 bp 60.02 121.85 86.28
B_1_S1_Biohub_coassembly_k141_4790102
Domain: Bacteria (75.34%)
73 62133 bp 60.79 125.95 88.32
B_1_S1_Biohub_coassembly_k141_1430632
Domain: Bacteria (77.14%)
70 66204 bp 59.83 121.83 88.96
B_1_S1_Biohub_coassembly_k141_4335575
Domain: Bacteria (92.65%)
68 75669 bp 60.18 122.51 88.96
B_1_S1_Biohub_coassembly_k141_4799041
Phylum: Chloroflexi (56.06%)
66 73448 bp 59.64 118.98 86.13
B_1_S1_Biohub_coassembly_k141_5494331
Domain: Bacteria (79.69%)
64 68772 bp 58.77 119.67 88.86
B_1_S1_Biohub_coassembly_k141_4321583
Domain: Bacteria (80.65%)
62 61664 bp 59.71 126.57 89.32
B_1_S1_Biohub_coassembly_k141_1505385
Domain: Bacteria (75%)
60 68904 bp 60.20 121.82 84.47
B_1_S1_Biohub_coassembly_k141_396562
Domain: Bacteria (78.95%)
57 72572 bp 61.66 128.43 88.24
B_1_S1_Biohub_coassembly_k141_4631016
Domain: Bacteria (83.93%)
56 55332 bp 60.43 127.21 88.10
B_1_S1_Biohub_coassembly_k141_584656
Domain: Bacteria (74.55%)
55 59314 bp 60.58 123.80 85.50
B_1_S1_Biohub_coassembly_k141_238303
Domain: Bacteria (81.82%)
55 73280 bp 60.23 124.50 86.17
B_1_S1_Biohub_coassembly_k141_2145208
Domain: Bacteria (83.64%)
55 38239 bp 59.59 120.87 86.46
B_1_S1_Biohub_coassembly_k141_4606337
Domain: Bacteria (75.47%)
53 63859 bp 61.42 130.69 86.40
B_1_S1_Biohub_coassembly_k141_4161219
Domain: Bacteria (86.79%)
53 70255 bp 60.09 120.29 86.21
B_1_S1_Biohub_coassembly_k141_4123397
Domain: Bacteria (82.69%)
52 50190 bp 61.29 126.19 83.26
B_1_S1_Biohub_coassembly_k141_5272197
Domain: Bacteria (82%)
50 56279 bp 59.14 123.05 89.36
B_1_S1_Biohub_coassembly_k141_1305590
Domain: Bacteria (79.59%)
49 61553 bp 59.30 119.50 88.38
B_1_S1_Biohub_coassembly_k141_2252890
Domain: Bacteria (87.23%)
47 51379 bp 60.62 127.40 85.32
B_1_S1_Biohub_coassembly_k141_2063804
Domain: Bacteria (91.3%)
46 62062 bp 59.42 119.49 88.60
B_1_S1_Biohub_coassembly_k141_101104
Domain: Bacteria (88.89%)
45 53033 bp 61.44 123.24 86.30
B_1_S1_Biohub_coassembly_k141_4576003
Domain: Bacteria (66.67%)
45 40843 bp 61.00 128.09 83.40
B_1_S1_Biohub_coassembly_k141_5096691
Domain: Bacteria (68.18%)
44 44909 bp 60.11 126.20 90.33
B_1_S1_Biohub_coassembly_k141_1344579
Domain: Bacteria (72.09%)
43 49100 bp 60.42 123.11 82.78
B_1_S1_Biohub_coassembly_k141_2120200
Domain: Bacteria (88.1%)
42 46539 bp 60.66 122.56 86.50
B_1_S1_Biohub_coassembly_k141_2048909
Domain: Bacteria (82.93%)
41 40080 bp 61.71 128.58 81.79
B_1_S1_Biohub_coassembly_k141_307709
Domain: Bacteria (85%)
40 51472 bp 60.48 123.98 85.23
B_1_S1_Biohub_coassembly_k141_5122490
Domain: Bacteria (75.76%)
33 36251 bp 61.76 126.47 87.07
B_1_S1_Biohub_coassembly_k141_856613
Domain: Bacteria (81.82%)
33 34375 bp 60.97 130.36 87.07
B_1_S1_Biohub_coassembly_k141_1823663
Domain: Bacteria (90.63%)
32 45824 bp 60.58 121.52 90.38
B_1_S1_Biohub_coassembly_k141_4426236
Phylum: Proteobacteria (56.25%)
32 42058 bp 58.96 121.02 88.89
B_1_S1_Biohub_coassembly_k141_3092269
Domain: Bacteria (90.32%)
31 29673 bp 61.81 126.94 87.44
B_1_S1_Biohub_coassembly_k141_3899075
Phylum: Chloroflexi (60%)
30 29121 bp 60.79 127.62 87.46
B_1_S1_Biohub_coassembly_k141_1394419
Domain: Bacteria (86.67%)
30 36115 bp 60.01 118.19 87.06
Displaying items 1-50 of 107 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.