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GD2018-4_B1_QB3_180703_Gammaproteobacteria_68_23

GD2018-4_B1_QB3_180703_Xanthomonadales_68_23
In projects: GD2018-4_B1_QB3_180703  |  genasci-metabolism  |  all_nc_groundwater_genomes

Consensus taxonomy: Xanthomonadales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

GD18-4_B1_Maxbin2_420_IF

Displaying 43 items
contig # features sequence size GC content (%) Cov Coding Density (%)
GD18-4_B1_scaffold_49615
Order: Xanthomonadales (58.97%)
312 345791 bp 68.16 23.45 94.12
GD18-4_B1_scaffold_6261
Order: Xanthomonadales (51.36%)
294 334446 bp 67.85 22.13 94.19
GD18-4_B1_scaffold_914332
Order: Xanthomonadales (52.76%)
290 336931 bp 66.90 21.66 93.64
GD18-4_B1_scaffold_599852
Class: Gammaproteobacteria (61.32%)
243 238603 bp 67.03 22.22 94.07
GD18-4_B1_scaffold_362896
Order: Xanthomonadales (54.97%)
191 209712 bp 68.65 22.89 94.41
GD18-4_B1_scaffold_500347
Order: Xanthomonadales (52.44%)
164 174472 bp 68.57 23.20 93.54
GD18-4_B1_scaffold_2117046
Order: Xanthomonadales (64.23%)
137 118398 bp 66.89 22.20 94.68
GD18-4_B1_scaffold_1603795
Phylum: Proteobacteria (63.93%)
122 127150 bp 68.21 23.26 93.72
GD18-4_B1_scaffold_1613498
Class: Gammaproteobacteria (61.98%)
121 142831 bp 69.09 24.02 93.60
GD18-4_B1_scaffold_685481
Class: Gammaproteobacteria (57.98%)
119 138871 bp 68.19 23.02 93.50
GD18-4_B1_scaffold_45535
Order: Xanthomonadales (54.39%)
114 114725 bp 67.81 21.93 93.22
GD18-4_B1_scaffold_250250
Order: Xanthomonadales (50.53%)
95 120539 bp 68.26 22.71 93.96
GD18-4_B1_scaffold_738170
Order: Xanthomonadales (69.47%)
95 112999 bp 67.87 22.30 94.02
GD18-4_B1_scaffold_1632153
Class: Gammaproteobacteria (63.83%)
94 97162 bp 67.65 22.70 93.64
GD18-4_B1_scaffold_257186
Phylum: Proteobacteria (76.67%)
90 109205 bp 67.73 22.75 94.06
GD18-4_B1_scaffold_1318594
Phylum: Proteobacteria (71.76%)
85 104803 bp 69.39 24.19 94.14
GD18-4_B1_scaffold_1752132
Order: Xanthomonadales (56.25%)
80 93377 bp 67.84 22.40 93.73
GD18-4_B1_scaffold_827015
Phylum: Proteobacteria (69.44%)
72 80370 bp 67.67 22.42 90.61
GD18-4_B1_scaffold_2087271
Order: Xanthomonadales (60.29%)
68 98069 bp 69.05 24.20 94.73
GD18-4_B1_scaffold_1357377
Order: Xanthomonadales (69.12%)
68 65957 bp 68.53 22.94 93.20
GD18-4_B1_scaffold_834595
Class: Gammaproteobacteria (66.15%)
65 76298 bp 67.90 23.82 89.39
GD18-4_B1_scaffold_322400
Class: Gammaproteobacteria (78.18%)
55 65227 bp 67.34 24.92 92.72
GD18-4_B1_scaffold_580172
Class: Gammaproteobacteria (65.91%)
44 44825 bp 66.26 23.52 86.73
GD18-4_B1_scaffold_2065195
Phylum: Proteobacteria (69.77%)
43 51109 bp 68.72 23.89 96.46
GD18-4_B1_scaffold_1606636
Class: Gammaproteobacteria (52.5%)
40 46257 bp 67.90 22.25 93.83
GD18-4_B1_scaffold_1600559
Phylum: Proteobacteria (71.79%)
39 86515 bp 66.40 21.79 94.97
GD18-4_B1_scaffold_1084981
Class: Gammaproteobacteria (57.58%)
33 30180 bp 67.59 21.95 88.52
GD18-4_B1_scaffold_1813428
Phylum: Proteobacteria (62.5%)
32 40933 bp 66.13 22.94 89.14
GD18-4_B1_scaffold_727444
Phylum: Proteobacteria (74.19%)
31 30736 bp 68.79 22.33 91.30
GD18-4_B1_scaffold_1878743
Phylum: Proteobacteria (70.37%)
27 37129 bp 65.68 20.71 91.55
GD18-4_B1_scaffold_100814
Order: Xanthomonadales (69.23%)
26 28199 bp 67.95 22.22 93.95
GD18-4_B1_scaffold_725121
Order: Xanthomonadales (50%)
14 15772 bp 67.35 22.58 94.08
GD18-4_B1_scaffold_1356754
Order: Xanthomonadales (61.54%)
13 20295 bp 67.12 22.51 92.08
GD18-4_B1_scaffold_732927
Order: Xanthomonadales (63.64%)
11 13346 bp 67.66 21.00 89.79
GD18-4_B1_scaffold_713015
Phylum: Proteobacteria (55.56%)
9 10228 bp 68.80 21.56 91.98
GD18-4_B1_scaffold_1929944
Order: Xanthomonadales (75%)
8 6529 bp 68.11 22.03 91.76
GD18-4_B1_scaffold_1500524
Genus: Arenimonas (50%)
8 8118 bp 66.20 22.32 86.47
GD18-4_B1_scaffold_212559
Order: Xanthomonadales (60%)
5 6618 bp 68.75 20.42 88.76
GD18-4_B1_scaffold_1001097
Order: Xanthomonadales (50%)
4 5444 bp 68.92 24.30 89.66
GD18-4_B1_scaffold_737076
Order: Xanthomonadales (50%)
4 5391 bp 69.34 21.54 86.03
GD18-4_B1_scaffold_365887
Species: Herbaspirillum sp. TSA66 (100%)
2 2042 bp 68.17 25.49 100.20
GD18-4_B1_scaffold_264313
Species: R_Acidobacteria_61_28 (50%)
2 3165 bp 65.81 20.57 97.54
GD18-4_B1_scaffold_1737530
Species: Rhodopirellula europaea (50%)
2 2142 bp 66.29 20.38 90.90
Displaying 43 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.