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GD18-4_B1_scaffold_42657

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_42657_1
unknown

Not on your lists

comp(245..514)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_2
unknown

Not on your lists

comp(698..988)
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_3
unknown

Not on your lists

1109..1609
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1594..2487)
-----------------
DNA (894bp)
protein (298aa)
Putative hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FL29_SORC5
hydrolase
Putative hydrolase {ECO:0000313|EMBL:CAN95173.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_42657_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2484..2984)
-----------------
DNA (501bp)
protein (167aa)
Acyl-CoA thioester hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G833_SORC5
acyl-CoA thioester hydrolase
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:CAN95942.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_42657_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..4720)
-----------------
DNA (1740bp)
protein (580aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QQ16_9DELT
putative protease with the C-terminal PDZ domain
Uncharacterized protein {ECO:0000313|EMBL:EPX58678.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
GD18-4_B1_scaffold_42657_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4832..6721
-----------------
DNA (1890bp)
protein (630aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN97597.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN97597.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZ28_SORC5
GD18-4_B1_scaffold_42657_8
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6725..7894)
-----------------
DNA (1170bp)
protein (390aa)
poly(3-hydroxyalkanoate) synthetase n=1 Tax=Hahella ganghwensis RepID=UPI000378B760
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AJD48307.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
GD18-4_B1_scaffold_42657_9
unknown

Not on your lists

7960..8496
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8515..9279)
-----------------
DNA (765bp)
protein (255aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
GD18-4_B1_scaffold_42657_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9368..10288
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8E8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41154.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_42657_12
unknown

Not on your lists

comp(10467..12497)
-----------------
DNA (2031bp)
protein (677aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12589..15360
-----------------
DNA (2772bp)
protein (924aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IR46_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:AKF10716.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_42657_14
unknown

Not on your lists

comp(15240..15479)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15600..16730
-----------------
DNA (1131bp)
protein (377aa)
NnrS family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C361_NITHN
NnrS family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
GD18-4_B1_scaffold_42657_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16738..19293)
-----------------
DNA (2556bp)
protein (852aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRY1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF07304.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_42657_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19426..19947
-----------------
DNA (522bp)
protein (174aa)
hpt; hypoxanthine-phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine-phosphoribosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMQ4_SORC5
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:EYF03568.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_42657_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19949..20434
-----------------
DNA (486bp)
protein (162aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKU1_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN96639.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_42657_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20464..21069)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein id=3370872 bin=GWA1_Treponema_62_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
GD18-4_B1_scaffold_42657_20
unknown

Not on your lists

21137..21781
-----------------
DNA (645bp)
protein (215aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_21
unknown

Not on your lists

21781..21987
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21991..22920)
-----------------
DNA (930bp)
protein (310aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2E7_SORCE
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress {ECO:0000313|EMBL:AKF05251.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_42657_23
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22917..23732)
-----------------
DNA (816bp)
protein (272aa)
PAP2 family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U314_MYXSD
PAP2 family protein
PAP2 family protein {ECO:0000313|EMBL:AGC41942.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
GD18-4_B1_scaffold_42657_24
uncultured delta proteobacterium, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23798..25363)
-----------------
DNA (1566bp)
protein (522aa)
Probable cytosol aminopeptidase n=1 Tax=uncultured delta proteobacterium RepID=H5SLM7_9DELT
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=34034 species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium.;"
hypothetical protein
GD18-4_B1_scaffold_42657_25
unknown

Not on your lists

25429..25884
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

GD18-4_B1_scaffold_42657_26
bacterium UASB270, Bacteria

Not on your lists

25881..27665
-----------------
DNA (1785bp)
protein (595aa)
hypothetical protein id=24437597 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacter curvatus genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterized protein {ECO:0000313|EMBL:GAK58713.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
GD18-4_B1_scaffold_42657_27
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27670..29316)
-----------------
DNA (1647bp)
protein (549aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HSI0_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:AKF08772.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
GD18-4_B1_scaffold_42657_28
Talaromyces stipitatus, Talaromyces, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(29428..30105)
-----------------
DNA (678bp)
protein (226aa)
Extracellular cysteine-rich protein, putative n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) RepID=B8LZY8_TALSN
Extracellular cysteine-rich protein, putative {ECO:0000313|EMBL:EED20920.1}; TaxID=441959 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces.;" source="Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /; NRRL 1006) (Penicillium stipitatum).;"
hypothetical protein
GD18-4_B1_scaffold_42657_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30190..31359)
-----------------
DNA (1170bp)
protein (390aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQX1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EYF05907.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_42657_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31390..33984
-----------------
DNA (2595bp)
protein (865aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003774AD6
Uncharacterized protein {ECO:0000313|EMBL:EYF07193.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying 30 items

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