ggKbase home page

GD18-4_B1_scaffold_27519

Search features with annotation key words

Displaying items 31-60 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_27519_31
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30214..30645)
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YHD3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYF02922.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_27519_32
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31037..31951)
-----------------
DNA (915bp)
protein (305aa)
General secretion pathway protein F n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDR6_SORC5
gspF; general secretion pathway protein F
General secretion pathway protein F {ECO:0000313|EMBL:CAN99390.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_27519_33
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32875..34641)
-----------------
DNA (1767bp)
protein (589aa)
Type II secretory protein GspE n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQZ6_SORCE
type II secretory protein GspE
Type II secretory protein GspE {ECO:0000313|EMBL:AGP33013.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_34
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34882..36264)
-----------------
DNA (1383bp)
protein (461aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBQ5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42289.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_35
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37619..38590)
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YD52_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42291.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_36
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38930..39295
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXV7_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF06165.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_27519_37

Not on your lists

39301..39753
-----------------
DNA (453bp)
protein (151aa)
aroQ; 3-dehydroquinate dehydratase type 2 (EC:4.2.1.10) id=14430999 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
aroQ; 3-dehydroquinate dehydratase II AroQ (EC:4.2.1.10)
Marine sediment metagenome DNA, contig: S01H1_S37921 {ECO:0000313|EMBL:GAG44818.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GD18-4_B1_scaffold_27519_38
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39769..40308
-----------------
DNA (540bp)
protein (180aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQ21_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37194.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_39
unknown

Not on your lists

40610..41110
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_40
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41144..42637
-----------------
DNA (1494bp)
protein (498aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDS9_SORC5
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:EYF02929.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
sigma-54 dependent DNA-binding response regulator
GD18-4_B1_scaffold_27519_41
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(42785..43231)
-----------------
DNA (447bp)
protein (149aa)
Transposase IS200-family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJ93_ROSCS
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:ABU57563.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
GD18-4_B1_scaffold_27519_42
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

43449..43748
-----------------
DNA (300bp)
protein (100aa)
Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INF8_9CHRO
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_27519_43
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

43752..44105
-----------------
DNA (354bp)
protein (118aa)
mRNA interferase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INF9_9CHRO
transcriptional modulator of maze/toxin, mazf
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_27519_44
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44128..45192)
-----------------
DNA (1065bp)
protein (355aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF14_9DELT
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_27519_45
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45351..46799
-----------------
DNA (1449bp)
protein (483aa)
PmbA protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQU7_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF01701.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pmbA; PmbA protein
GD18-4_B1_scaffold_27519_46
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46868..50953)
-----------------
DNA (4086bp)
protein (1362aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHT8_SORC5
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:EYF05582.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_27519_47
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51236..52348)
-----------------
DNA (1113bp)
protein (371aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABC83940.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABC83940.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IH79_ANADE
GD18-4_B1_scaffold_27519_48
unknown

Not on your lists

comp(52548..53054)
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_49
unknown

Not on your lists

comp(53152..53901)
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_50
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54332..55600
-----------------
DNA (1269bp)
protein (423aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0W8_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02247.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_27519_51
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55705..57207
-----------------
DNA (1503bp)
protein (501aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y238_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38536.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_52
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57247..58200
-----------------
DNA (954bp)
protein (318aa)
galE3; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CAN93920.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CAN93920.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
UDP-glucose 4-epimerase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWE7_SORC5
GD18-4_B1_scaffold_27519_53
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58190..59395)
-----------------
DNA (1206bp)
protein (402aa)
add; adenosine deaminase (EC:3.5.4.4)
Putative Adenosine deaminase {ECO:0000313|EMBL:CAN99178.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CAN99178.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Putative Adenosine deaminase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9G3_SORC5
GD18-4_B1_scaffold_27519_54
unknown

Not on your lists

59517..60308
-----------------
DNA (792bp)
protein (264aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_55
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60351..63092
-----------------
DNA (2742bp)
protein (914aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSP4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93809.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_27519_56
unknown

Not on your lists

comp(62907..63563)
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_57
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64408..65067
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365DB46
transferase hexapeptide repeat containing protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
GD18-4_B1_scaffold_27519_58
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65067..66227
-----------------
DNA (1161bp)
protein (387aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000382E484
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
GD18-4_B1_scaffold_27519_59
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66260..68296
-----------------
DNA (2037bp)
protein (679aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJN3_ANASK
polysaccharide biosynthesis protein CapD
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ACG75614.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
GD18-4_B1_scaffold_27519_60
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

68293..68961
-----------------
DNA (669bp)
protein (223aa)
Sugar transferase n=1 Tax=Clostridium sp. CAG:138 RepID=R6BIP2_9CLOT
sugar transferase
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
Displaying items 31-60 of 76 in total

View Taxonomy