ggKbase home page

GD18-4_B1_scaffold_66234

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_66234_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2145
-----------------
DNA (2145bp)
protein (715aa)
Protein disaggregation chaperone n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIH7_SORCE
ClpB protein {ECO:0000313|EMBL:AKF10482.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
protein disaggregation chaperone
GD18-4_B1_scaffold_66234_2
unknown

Not on your lists

comp(2188..2619)
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_3
unknown

Not on your lists

comp(2632..2916)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_4
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3296..4099)
-----------------
DNA (804bp)
protein (268aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
1-acyl-sn-glycerol-3-phosphate acyltransferase family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D5C4_MYXXD
1-acyl-sn-glycerol-3-phosphate acyltransferase
GD18-4_B1_scaffold_66234_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4201..4800
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCI8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39380.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_66234_6
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5073..6062)
-----------------
DNA (990bp)
protein (330aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC id=14626101 bin=bin7_NC10_sister species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit
Tax=CG_Delta_07
GD18-4_B1_scaffold_66234_7
unknown

Not on your lists

comp(6157..6441)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_8

Not on your lists

comp(6584..7147)
-----------------
DNA (564bp)
protein (188aa)
PHA accumulation regulator DNA-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LK82_HALO1
Marine sediment metagenome DNA, contig: S03H2_L06203 {ECO:0000313|EMBL:GAH43178.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PHA accumulation regulator DNA-binding protein
GD18-4_B1_scaffold_66234_9
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7390..8364
-----------------
DNA (975bp)
protein (325aa)
Tax=CG_Delta_07
GD18-4_B1_scaffold_66234_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8361..9341
-----------------
DNA (981bp)
protein (327aa)
Alpha/beta hydrolase fold protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5Q1_RHOVT
alpha/beta hydrolase fold protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_66234_11
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9338..10930
-----------------
DNA (1593bp)
protein (531aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJY1_MYXSD
hypothetical protein
Tax=CG_Delta_07
GD18-4_B1_scaffold_66234_12
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10933..11775
-----------------
DNA (843bp)
protein (281aa)
Tax=CG_Delta_07
GD18-4_B1_scaffold_66234_13
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12156..12446
-----------------
DNA (291bp)
protein (97aa)
Tax=CG_Delta_07
GD18-4_B1_scaffold_66234_14
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12462..14219
-----------------
DNA (1758bp)
protein (586aa)
AMP-dependent synthetase and ligase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LK81_HALO1
AMP-dependent synthetase and ligase
Tax=CG_Delta_07
GD18-4_B1_scaffold_66234_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14222..15454
-----------------
DNA (1233bp)
protein (411aa)
poly(3-hydroxyalkanoate) synthetase (EC:2.3.1.-)
Polyhydroxyalkanoic acid synthase {ECO:0000313|EMBL:AKF11214.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
poly(R)-hydroxyalkanoic acid synthase subunit PhaC id=14626101 bin=bin7_NC10_sister species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
GD18-4_B1_scaffold_66234_16
unknown

Not on your lists

comp(15457..16089)
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_17
unknown

Not on your lists

comp(16121..16726)
-----------------
DNA (606bp)
protein (202aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_18
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16723..17607)
-----------------
DNA (885bp)
protein (295aa)
Metallophosphoesterase id=4703027 bin=GWA2_Bacteroidetes_A19_40_15 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
GD18-4_B1_scaffold_66234_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17785..19026
-----------------
DNA (1242bp)
protein (414aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5Q9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97828.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_66234_20
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19033..20409)
-----------------
DNA (1377bp)
protein (459aa)
tnaA; tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] id=14629105 bin=bin8_Chloro species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
tryptophanase (EC:4.1.99.1)
Tax=RBG_16_RIF_CHLX_69_14_curated
GD18-4_B1_scaffold_66234_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20445..21692
-----------------
DNA (1248bp)
protein (416aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G0W8_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF04757.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_66234_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21705..22847)
-----------------
DNA (1143bp)
protein (381aa)
Lanthionine synthetase C-like family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXN0_SORC5
lanthionine synthetase C-like family protein
Lanthionine synthetase C-like family protein {ECO:0000313|EMBL:CAN95531.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_66234_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22878..23582)
-----------------
DNA (705bp)
protein (235aa)
def2; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Peptide deformylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYX4_SORC5
GD18-4_B1_scaffold_66234_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23598..24293)
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8G5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40656.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_66234_25
unknown

Not on your lists

comp(24305..24619)
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_26
unknown

Not on your lists

comp(24670..25146)
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25221..26108
-----------------
DNA (888bp)
protein (296aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFM6_SORC5
GD18-4_B1_scaffold_66234_28
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26310..26948)
-----------------
DNA (639bp)
protein (213aa)
ATPase AAA n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002378242
ATPase AAA {ECO:0000313|EMBL:KIM02653.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
AAA ATPase
GD18-4_B1_scaffold_66234_29
unknown

Not on your lists

comp(27182..28429)
-----------------
DNA (1248bp)
protein (416aa)

This feature has no annotations

GD18-4_B1_scaffold_66234_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28579..29874)
-----------------
DNA (1296bp)
protein (432aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12557219 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 1-30 of 78 in total

View Taxonomy