ggKbase home page

GD18-4_B1_scaffold_156141

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_156141_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155..541
-----------------
DNA (387bp)
protein (129aa)
Glutathione S-transferase, N-terminal domain n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0LDX3_MAGSM
glutathione S-transferase domain-containing protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
GD18-4_B1_scaffold_156141_2
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(923..2425)
-----------------
DNA (1503bp)
protein (501aa)
glycosyl transferase family protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
GD18-4_B1_scaffold_156141_3
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2430..3191)
-----------------
DNA (762bp)
protein (254aa)
Regulator of chromosome condensation, RCC1 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1S7_ROSS1
regulator of chromosome condensation, RCC1
Regulator of chromosome condensation, RCC1 {ECO:0000313|EMBL:ABQ92830.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
GD18-4_B1_scaffold_156141_4

Not on your lists

comp(3179..3778)
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A521_9ACTN
Marine sediment metagenome DNA, contig: S06H3_S11169 {ECO:0000313|EMBL:GAI46087.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
GD18-4_B1_scaffold_156141_5
unknown

Not on your lists

comp(3781..4710)
-----------------
DNA (930bp)
protein (310aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_6
unknown

Not on your lists

4936..5523
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_7
unknown

Not on your lists

comp(5689..6750)
-----------------
DNA (1062bp)
protein (354aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_8
unknown

Not on your lists

7014..7763
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_9
unknown

Not on your lists

comp(7844..8209)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_10
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8358..8660)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Microcystis sp. T1-4 RepID=I4IBH6_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:CCI31650.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
Plasmid stabilization system protein
GD18-4_B1_scaffold_156141_11
unknown

Not on your lists

comp(8657..8839)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9142..9495
-----------------
DNA (354bp)
protein (118aa)
IstB domain protein, ATP-binding protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DNY5_9NOCA
IstB-like ATP-binding protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
GD18-4_B1_scaffold_156141_13
unknown

Not on your lists

9492..9746
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_14
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9841..10188
-----------------
DNA (348bp)
protein (116aa)
DNA-binding protein HU-alpha n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0E3M1_9BURK
DNA-binding protein HU-alpha
DNA-binding protein HU-alpha {ECO:0000313|EMBL:AFT90449.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
GD18-4_B1_scaffold_156141_15
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10480..10776
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM32_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF86380.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
hypothetical protein
GD18-4_B1_scaffold_156141_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10773..11876
-----------------
DNA (1104bp)
protein (368aa)
Transposase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XG96_SORCE
transposase
Transposase {ECO:0000313|EMBL:AGP32152.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_156141_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12026..12820)
-----------------
DNA (795bp)
protein (265aa)
SEC-C motif domain protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PC30_9DELT
SEC-C motif domain protein {ECO:0000313|EMBL:EPX59847.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
SecC motif-containing protein
GD18-4_B1_scaffold_156141_18
Legionella hackeliae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12867..13571)
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI00036D7242
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEK12317.1}; TaxID=449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;"
GD18-4_B1_scaffold_156141_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13744..14688
-----------------
DNA (945bp)
protein (315aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y384_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38916.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_156141_20
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14982..15521
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y3Q0_SORCE
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_156141_21
unknown

Not on your lists

comp(15432..16025)
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_22
unknown

Not on your lists

comp(16167..16832)
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

17380..17706
-----------------
DNA (327bp)
protein (109aa)
GYD family protein n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3FG33_9ACTO id=5223900 bin=16ft_combo_ws3_JS1 species=Streptomyces bottropensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
GD18-4_B1_scaffold_156141_24
unknown

Not on your lists

comp(17860..18009)
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_25
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18188..18493)
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBQ7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10139.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
monooxygenase
GD18-4_B1_scaffold_156141_26
unknown

Not on your lists

comp(18734..18979)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_27
unknown

Not on your lists

19311..19982
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

GD18-4_B1_scaffold_156141_28
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19988..21247)
-----------------
DNA (1260bp)
protein (420aa)
Capsule biosynthesis protein capA {ECO:0000313|EMBL:KIG13022.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Capsule biosynthesis protein capA id=3297940 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
GD18-4_B1_scaffold_156141_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21582..22241
-----------------
DNA (660bp)
protein (220aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLA2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33256.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_156141_30
unknown

Not on your lists

comp(22257..22796)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

Displaying items 1-30 of 63 in total

View Taxonomy