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GD18-4_B1_scaffold_158492

Search features with annotation key words

Displaying items 91-107 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_158492_90
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(105159..105725)
-----------------
DNA (567bp)
protein (189aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GHX9_9FIRM
pyrrolidone-carboxylate peptidase
GD18-4_B1_scaffold_158492_91
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(105734..107089)
-----------------
DNA (1356bp)
protein (452aa)
Putative cAMP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GL27_SORC5
cAMP-binding protein
Putative cAMP-binding protein {ECO:0000313|EMBL:CAN90217.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_92
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(107128..108069)
-----------------
DNA (942bp)
protein (314aa)
Alpha-L-glutamate ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJR7_SORCE
alpha-L-glutamate ligase
Ribosomal protein S6 modification protein {ECO:0000313|EMBL:CAN97075.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_93
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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108229..109719
-----------------
DNA (1491bp)
protein (497aa)
Glutamate--tRNA ligase n=2 Tax=Anaeromyxobacter RepID=SYE_ANASK
Glutamyl-tRNA synthetase {ECO:0000313|EMBL:AKF04759.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
gltX; glutamyl-tRNA synthetase
GD18-4_B1_scaffold_158492_94
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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109726..110853
-----------------
DNA (1128bp)
protein (376aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2F5_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF00417.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_158492_95
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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111223..111789
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9T2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42292.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158492_96
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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111972..114842
-----------------
DNA (2871bp)
protein (957aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Valine--tRNA ligase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QKY7_9DELT
valS; valyl-tRNA synthetase
GD18-4_B1_scaffold_158492_97
unknown

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114912..115358
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

GD18-4_B1_scaffold_158492_98
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(115635..116696)
-----------------
DNA (1062bp)
protein (354aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAU7_SORC5
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:AKF10064.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_158492_99
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(116850..117512)
-----------------
DNA (663bp)
protein (221aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
NADH-quinone oxidoreductase subunit I n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSV1_SORCE
hypothetical protein
GD18-4_B1_scaffold_158492_100
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117531..118901)
-----------------
DNA (1371bp)
protein (457aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
NADH-quinone oxidoreductase subunit H n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKG3_SORCE
hypothetical protein
GD18-4_B1_scaffold_158492_101
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118921..120504)
-----------------
DNA (1584bp)
protein (528aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XML2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33671.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158492_102
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120677..121891)
-----------------
DNA (1215bp)
protein (405aa)
NADH dehydrogenase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XG38_SORCE
NADH-ubiquinone oxidoreductase chain D {ECO:0000313|EMBL:AKF08123.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_158492_103
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(121934..122605)
-----------------
DNA (672bp)
protein (224aa)
nuoC1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GUY8_SORC5
NADH-ubiquinone oxidoreductase chain C {ECO:0000313|EMBL:AKF08124.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_158492_104
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122602..123126)
-----------------
DNA (525bp)
protein (175aa)
nuoB1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=NUOB1_SORC5
NADH-ubiquinone oxidoreductase chain B {ECO:0000313|EMBL:AKF08125.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_158492_105
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(123220..123579)
-----------------
DNA (360bp)
protein (120aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHT0_SORCE
NADH-quinone oxidoreductase
GD18-4_B1_scaffold_158492_106
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123788..123991)
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2H5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39697.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying items 91-107 of 107 in total

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