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GD18-4_B1_scaffold_264856

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_264856_1
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(46..744)
-----------------
DNA (699bp)
protein (233aa)
Uncharacterized protein id=3804849 bin=GWF2_WWE1_40_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1
hypothetical protein
Tax=RBG_13_Actinobacteria_55_18_curated
GD18-4_B1_scaffold_264856_2
unknown

Not on your lists

comp(827..1036)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

GD18-4_B1_scaffold_264856_3
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1176..3599
-----------------
DNA (2424bp)
protein (808aa)
FG-GAP repeat/HVR domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD83_9DELT
FG-GAP repeat/HVR domain protein {ECO:0000313|EMBL:EDM76158.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
FG-GAP repeat-containing protein
GD18-4_B1_scaffold_264856_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3601..4002)
-----------------
DNA (402bp)
protein (134aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWT4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36831.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_264856_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4070..5116)
-----------------
DNA (1047bp)
protein (349aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC79_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02292.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_264856_6
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5269..6051
-----------------
DNA (783bp)
protein (261aa)
Alpha/beta hydrolase fold-containing protein n=2 Tax=Chloroflexus RepID=A9WHX2_CHLAA
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:ABY34240.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
GD18-4_B1_scaffold_264856_7

Not on your lists

6057..8255
-----------------
DNA (2199bp)
protein (733aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5S8W1_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL52597.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
GD18-4_B1_scaffold_264856_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8336..9361)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FW28_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92337.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_264856_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9580..10734)
-----------------
DNA (1155bp)
protein (385aa)
Glycosyltransferase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SS76_9DELT
Glycosyltransferase {ECO:0000313|EMBL:AKF08417.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_264856_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10775..12115)
-----------------
DNA (1341bp)
protein (447aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94237.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94237.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EVM0_SORC5
GD18-4_B1_scaffold_264856_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(12263..12697)
-----------------
DNA (435bp)
protein (145aa)
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AIE83792.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=12557539 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GD18-4_B1_scaffold_264856_12
unknown

Not on your lists

12808..12999
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

GD18-4_B1_scaffold_264856_13
unknown

Not on your lists

13046..13723
-----------------
DNA (678bp)
protein (226aa)

This feature has no annotations

GD18-4_B1_scaffold_264856_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13675..14676)
-----------------
DNA (1002bp)
protein (334aa)
Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7E6_ANADF
aliphatic sulfonates ABC transporter substrate-binding protein
Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein {ECO:0000313|EMBL:ABS24642.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_264856_15
GWA2_OP3_52_12_curated, Omnitrophica, Bacteria

Not on your lists

comp(14679..15398)
-----------------
DNA (720bp)
protein (240aa)
phosphoadenylylsulfate reductase (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase id=4809917 bin=GWA2_OP3_52_12 species=Parvularcula bermudensis genus=Parvularcula taxon_order=Parvularculales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=GWA2_OP3_52_12_curated
GD18-4_B1_scaffold_264856_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15395..17101)
-----------------
DNA (1707bp)
protein (569aa)
Ferredoxin--nitrite reductase id=4066346 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
GD18-4_B1_scaffold_264856_17
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17102..17686)
-----------------
DNA (585bp)
protein (195aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LDH1_9CYAN
GD18-4_B1_scaffold_264856_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17760..18434
-----------------
DNA (675bp)
protein (225aa)
Transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQQ6_SORC5
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CAN90481.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_264856_19
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18492..19403
-----------------
DNA (912bp)
protein (304aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5R2_PELTS
TauB; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:BAF58417.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
GD18-4_B1_scaffold_264856_20
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19360..20088
-----------------
DNA (729bp)
protein (243aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UH74_ANASK
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACG75316.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
GD18-4_B1_scaffold_264856_21
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20091..20885
-----------------
DNA (795bp)
protein (265aa)
Sirohaem synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE22_PHEZH
siroheme synthase
Tax=CG_Delta_03
GD18-4_B1_scaffold_264856_22
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20899..21717
-----------------
DNA (819bp)
protein (273aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D8K3_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:KFA94309.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
GD18-4_B1_scaffold_264856_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(21686..22270)
-----------------
DNA (585bp)
protein (195aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEB7_ANADE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_264856_24
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22411..23367
-----------------
DNA (957bp)
protein (319aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CFI1_MYCTH
Putative uncharacterized protein {ECO:0000313|EMBL:EHI13260.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 19527.;"
histidyl-tRNA synthetase
GD18-4_B1_scaffold_264856_25
unknown

Not on your lists

23364..23951
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

GD18-4_B1_scaffold_264856_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23956..24384)
-----------------
DNA (429bp)
protein (143aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XT65_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF05112.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_264856_27
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

24432..24755
-----------------
DNA (324bp)
protein (108aa)
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Burkholderia RepID=D5WEN5_BURSC id=5086610 bin=GWF1_OP11_31_35_complete species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KKU91185.1}; TaxID=1618660 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
FKBP-type peptidylprolyl cis-trans isomerase
GD18-4_B1_scaffold_264856_28
R_RIF_OP11_01_40_20, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

24764..25234
-----------------
DNA (471bp)
protein (157aa)
Peptidyl-prolyl cis-trans isomerase id=3297980 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ytfC; FKBP-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated
GD18-4_B1_scaffold_264856_29
unknown

Not on your lists

25319..25813
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

GD18-4_B1_scaffold_264856_30
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25813..26295
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KIG16909.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Displaying items 1-30 of 85 in total

View Taxonomy