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GD18-4_B1_scaffold_424991

Search features with annotation key words

Displaying items 61-90 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_424991_61
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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67691..69124
-----------------
DNA (1434bp)
protein (478aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LI76_HALO1
Flagellar regulatory protein FleQ {ECO:0000313|EMBL:AKF02897.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Fis family transcriptional regulator
GD18-4_B1_scaffold_424991_62
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69202..71094
-----------------
DNA (1893bp)
protein (631aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XI96_SORCE
malto-oligosyltrehalose trehalohydrolase
GD18-4_B1_scaffold_424991_63
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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71294..72388
-----------------
DNA (1095bp)
protein (365aa)
Radical SAM domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URU7_ROSS1
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABQ89350.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
GD18-4_B1_scaffold_424991_64
Lysinibacillus massiliensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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72518..74602
-----------------
DNA (2085bp)
protein (695aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529.;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037B8ECD
DNA ligase, NAD-dependent
GD18-4_B1_scaffold_424991_65
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74595..75740
-----------------
DNA (1146bp)
protein (382aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=LPXB_ANADE
GD18-4_B1_scaffold_424991_66
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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75777..76799
-----------------
DNA (1023bp)
protein (341aa)
Pirin family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090Q0_STIAD
Pirin {ECO:0000313|EMBL:KFE62652.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
pirin family protein
GD18-4_B1_scaffold_424991_67
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

Not on your lists

comp(76800..78026)
-----------------
DNA (1227bp)
protein (409aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RS83_FIBSS
putative type III restriction-modification system, Mod subunit
Putative type III restriction-modification system, Mod subunit {ECO:0000313|EMBL:ADL25504.1}; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 / S85).;"
GD18-4_B1_scaffold_424991_68
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(78189..78662)
-----------------
DNA (474bp)
protein (158aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV91_SYNAS
cytoplasmic protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC78000.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
GD18-4_B1_scaffold_424991_69
unknown

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comp(79218..80159)
-----------------
DNA (942bp)
protein (314aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_70
unknown

Not on your lists

comp(80260..81339)
-----------------
DNA (1080bp)
protein (360aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_71
unknown

Not on your lists

comp(81397..81534)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_72
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81851..82954)
-----------------
DNA (1104bp)
protein (368aa)
phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W2L8_DESIS
6-phosphofructokinase {ECO:0000313|EMBL:AKF09813.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_424991_73
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(83035..84834)
-----------------
DNA (1800bp)
protein (600aa)
PAS/PAC sensor hybrid histidine kinase id=4822538 bin=GWC2_Chloroflexi_73_18 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PAS sensor protein
Tax=GWC2_RIF_CHLX_73_18_curated
GD18-4_B1_scaffold_424991_74
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85058..85948)
-----------------
DNA (891bp)
protein (297aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMH9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33769.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_424991_75
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85952..86449)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPL8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33770.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_424991_76
unknown

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comp(86454..89324)
-----------------
DNA (2871bp)
protein (957aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_77
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89463..90125)
-----------------
DNA (663bp)
protein (221aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKF0_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP33657.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
hypothetical protein
GD18-4_B1_scaffold_424991_78
unknown

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comp(90247..90996)
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_79
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91454..91960
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8X3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94699.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_424991_80
unknown

Not on your lists

comp(91961..92335)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_81
unknown

Not on your lists

comp(92332..93342)
-----------------
DNA (1011bp)
protein (337aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_82
unknown

Not on your lists

93640..94428
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_83
unknown

Not on your lists

94599..95768
-----------------
DNA (1170bp)
protein (390aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_84
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95778..96860
-----------------
DNA (1083bp)
protein (361aa)
Peptidase n=1 Tax=Mycobacterium avium 10-5560 RepID=V7NRF2_MYCAV
Uncharacterized protein {ECO:0000313|EMBL:AKF11109.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
peptidase
GD18-4_B1_scaffold_424991_85
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96914..97423
-----------------
DNA (510bp)
protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZPE0_9RHOO
GD18-4_B1_scaffold_424991_86
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97420..98607
-----------------
DNA (1188bp)
protein (396aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV11_9GAMM
GD18-4_B1_scaffold_424991_87
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98700..99428)
-----------------
DNA (729bp)
protein (243aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LM92_HALO1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY16798.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
GD18-4_B1_scaffold_424991_88
unknown

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comp(99670..100413)
-----------------
DNA (744bp)
protein (248aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_89
unknown

Not on your lists

100463..100666
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

GD18-4_B1_scaffold_424991_90
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101143..102336)
-----------------
DNA (1194bp)
protein (398aa)
Acetyl-CoA acetyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D8_ANADF
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:EYF03574.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
acetyl-CoA acetyltransferase
Displaying items 61-90 of 113 in total

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