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GD18-4_B1_scaffold_987992

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_987992_1
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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1..153
-----------------
DNA (153bp)
protein (51aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2D765_TRIVA
Putative uncharacterized protein {ECO:0000313|EMBL:EAY23582.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
GD18-4_B1_scaffold_987992_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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255..1394
-----------------
DNA (1140bp)
protein (380aa)
Mucin and cadherin-like protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWM9_SORC5
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000313|EMBL:EYF07930.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
mucin and cadherin-like protein
GD18-4_B1_scaffold_987992_3
unknown

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comp(1416..2048)
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_4
unknown

Not on your lists

2433..2549
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_5
unknown

Not on your lists

comp(2740..3159)
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_6
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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comp(3144..3410)
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037A8485
serine/threonine protein kinase
Tax=RBG_13_OP8X_37_8_curated
GD18-4_B1_scaffold_987992_7
unknown

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3857..4507
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_8
unknown

Not on your lists

comp(4529..5854)
-----------------
DNA (1326bp)
protein (442aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_9
unknown

Not on your lists

5910..6326
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_10
unknown

Not on your lists

6323..7018
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_11
unknown

Not on your lists

7015..8106
-----------------
DNA (1092bp)
protein (364aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8132..9181
-----------------
DNA (1050bp)
protein (350aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FH17_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98174.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_987992_trna_1
unknown

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9247..9320
-----------------
DNA (74bp)
transferRNA Arg
GD18-4_B1_scaffold_987992_13
unknown

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comp(9558..10865)
-----------------
DNA (1308bp)
protein (436aa)

This feature has no annotations

GD18-4_B1_scaffold_987992_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10862..11659)
-----------------
DNA (798bp)
protein (266aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHA9_SORC5
dapB; hypothetical protein
GD18-4_B1_scaffold_987992_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11659..12552)
-----------------
DNA (894bp)
protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEF6_SORCE
dihydrodipicolinate synthase
GD18-4_B1_scaffold_987992_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12765..13583)
-----------------
DNA (819bp)
protein (273aa)
pp2c11; phosphoprotein phosphatase (EC:3.1.3.16)
Phosphoprotein phosphatase {ECO:0000313|EMBL:CAN96338.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CAN96338.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Phosphoprotein phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GGK4_SORC5
GD18-4_B1_scaffold_987992_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13805..14362)
-----------------
DNA (558bp)
protein (186aa)
Ribosome-recycling factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RRF_SORC5
rrf; hypothetical protein
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_987992_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14700..15575
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPG1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34399.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_987992_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15618..16136)
-----------------
DNA (519bp)
protein (173aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
def1; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWS7_SORC5
GD18-4_B1_scaffold_987992_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16234..16713)
-----------------
DNA (480bp)
protein (160aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
cumB; zinc-binding hydrolase (EC:3.5.4.-)
Putative zinc-binding hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6W0_SORC5
GD18-4_B1_scaffold_987992_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16710..17525)
-----------------
DNA (816bp)
protein (272aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKW3_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF06174.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_987992_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17504..18373)
-----------------
DNA (870bp)
protein (290aa)
Uncharacterized membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVL1_SORC5
membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:CAN90772.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_987992_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18443..18808
-----------------
DNA (366bp)
protein (122aa)
ADP-ribose pyrophosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FIQ7_SORC5
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CAN91877.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_987992_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18777..19910)
-----------------
DNA (1134bp)
protein (378aa)
ribD1; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWT0_SORC5
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_987992_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19907..20464)
-----------------
DNA (558bp)
protein (186aa)
Transcriptional repressor NrdR n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=NRDR_ANADF
Ribonucleotide reductase transcriptional regulator NrdR {ECO:0000313|EMBL:AKF06936.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
nrdR; transcriptional regulator NrdR
GD18-4_B1_scaffold_987992_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20642..21694)
-----------------
DNA (1053bp)
protein (351aa)
yedO; D-cysteine desulfhydrase (EC:3.5.99.7)
YedO protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCV5_SORC5
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:EYF04101.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_987992_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21699..22202)
-----------------
DNA (504bp)
protein (168aa)
Biotin/lipoic acid binding domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CGT1_MYXFH
Methylcrotonyl-CoA carboxylase biotin-containing subunit {ECO:0000313|EMBL:EYF04100.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
biotin/lipoic acid binding domain-containing protein
GD18-4_B1_scaffold_987992_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22216..24006)
-----------------
DNA (1791bp)
protein (597aa)
DNA repair protein RecN n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F012_SORC5
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
recN; recombination protein N
GD18-4_B1_scaffold_987992_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24006..25223)
-----------------
DNA (1218bp)
protein (406aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQA4_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF05615.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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