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GD18-4_B1_scaffold_207179_7

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 5687..6955

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=uncultured delta proteobacterium RepID=H5SJD0_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 393.0
  • Bit_score: 233
  • Evalue 3.80e-58
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=34034 species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 393.0
  • Bit_score: 233
  • Evalue 5.30e-58
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 313.0
  • Bit_score: 230
  • Evalue 6.90e-58

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Taxonomy

uncultured delta proteobacterium → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1269
ATGCCCGCAACGCTCGACCCGCAGAGCCGCGGTGCGTATGCCGCCTGGGCACGCGCGCTCGGCACGACCCCCAAGCCGATCGGCCGCGAAGGCGAGGCCGCGATCTCGCAGGAGATCGAGCGCGCCGAGCAGCGCCTGATCGCGACGGCGATCGCCACGCGCGCCGGTCAGGCCGTCCTGGCGAGGCTCCGCGACGATCTGGAGCAGAAGTACGTCCGGGTGACCGATCTCGTCCGCCAGCAATCGGGTGAGGCCGGCGCCGATCCGGTGTTCGACGAGGCGACGGCGACGCTCTCCGCCCTCGCGTCGATCGAGGCGGTCGAGCGCGCCGCGCTGTCGTACGGGCGGGCGCGGCAGCGCAGCCCGAACGCGTCGGCCGAGCAGGTGTACGAGGCGTTGAGCGCGCTCGATCTGTCGCGGCAGGCGACGCGGAAGCTGATCGAGCGCCTGCTCTTCGCGGTGCGGGCGCCGCACGGCGACGTGTCCGACGACGTGCGTGCCGCCGTCGAGCAGCAGCACCGTCGCGTGCAGCGCGCGAAGAACCGCTTCGTGCACGCCAACGTCCGCCTCGTCGCCTCGGTCGCCCGTCGACCCGAGTACCAGGATCGCGGGCTCGATTTCCTCGATCTCGTGCAGGAGGGGACGTTCGGGCTGATGCAGGCCGTCGACGGCTTCGACTGGCGCCGCGGGCTCAAGCTCAGCACCTACGCGACCTGGTGGATCCGCCAGGCGCTGCAGCGCGCGCTCGCCGAGCACTCGCGCACCATCCGCCTGCCGTTCCACGTCAACGAGCTGCTGATGAAGATCCACCGCGTTTCGCGCGAGCACGCGGCGCGCCACGGCAGCGAGCCGACGCACGGGCAGATCGCCGCGGCGCTCGGGCTCGAGGTCCAGAAGATCGAGGAGGCGCTCGAGGCCTCGCGCATCGAGCCGCGGTCGCTCGACGCGCCGCTCGGGGGGGCCGAGGACTCACGCCTGATCGATCTGGTTGCCGACGAGCACGCCGTGGTCGCCGACGACGCGGTCACGAGCAATGCGCGCGCCCGCGTCGCGCGGGGCGCGCTCTCGATGCTGAGCCCGCGCGATCAGCTCATCGTTCGGCGGCGCTTCGGCCTCGACGACGGCCGGGAGTACACGCTCGCCGAGATCGGCGCCGAGCTCGGCCTCACGCGCGAGCGTGTCCGGCAGCTCGAGGCCCGCGCGCTGGCGAAGCTGCAGCGCGCGCTCGCCCGCCGCGCCGGCGCGACCGACCCGCGCGACGCGGCCTGA
PROTEIN sequence
Length: 423
MPATLDPQSRGAYAAWARALGTTPKPIGREGEAAISQEIERAEQRLIATAIATRAGQAVLARLRDDLEQKYVRVTDLVRQQSGEAGADPVFDEATATLSALASIEAVERAALSYGRARQRSPNASAEQVYEALSALDLSRQATRKLIERLLFAVRAPHGDVSDDVRAAVEQQHRRVQRAKNRFVHANVRLVASVARRPEYQDRGLDFLDLVQEGTFGLMQAVDGFDWRRGLKLSTYATWWIRQALQRALAEHSRTIRLPFHVNELLMKIHRVSREHAARHGSEPTHGQIAAALGLEVQKIEEALEASRIEPRSLDAPLGGAEDSRLIDLVADEHAVVADDAVTSNARARVARGALSMLSPRDQLIVRRRFGLDDGREYTLAEIGAELGLTRERVRQLEARALAKLQRALARRAGATDPRDAA*