ggKbase home page

GD18-4_B1_scaffold_262537_10

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(7890..9203)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKU6_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 394.0
  • Bit_score: 246
  • Evalue 4.40e-62
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 394.0
  • Bit_score: 246
  • Evalue 1.30e-62
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CAN96641.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 394.0
  • Bit_score: 246
  • Evalue 6.20e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
TTGCCCCGTGCCCCCAACGAGACCGCCGAAGAACCGGCCCTCTCGCCCGACCCACCCCCGCCCCCTCCCGGCCTCCTCCTCCTCTGGTCCGGCACCGACCCCACCTTCGTCGCCCGCCCGCTGCACCGTCCCCTGAAGATCGGCCGCAGCGAAGACACCGACGTCTGCCTCGGCGCCGACCGGTGGGTCTCGAGCCTCCACGCGGAGGTCTTCGCCTCGCTCGGCAGCTTCGTCGTCCGCGATCTCGGCAGCCGGCACGGCACCTTCGTCAACGGCGCGCGCGTCACCGAGGTCTCCGTCGAGCCCGGCGCCGTCGTGCGCGTCGGCCGCACGGTGATGCTCCTCGGGCCCCTCCCGGTGGGCCCCGCGACCGAGATCGACGGCGGCTACGTGGTCAGCGCCCACCAGCGCCGCCTCCGCGCCGCGGTGAGCGAGGCCGCGCGGCTCGGGATCGATCTGCTCATCCTCGGCGACACCGGCGCCGGCAAGGAGGCGCTCGCGAGGCACTACCACGCCTGCGGCCCACGCGCGCGCGGACCGTTCGTCGCGTGGTCGGCGGCGACGTTCCAGCCGACCACGGCGGAGGCCGATCTGTTCGGCTCGCGGCGCGGAGGGTTCACCGGCGCGGTCGATCGCGAGGGGCTGCTCGCGCAAGCCGACGGCGGGACGCTCTACCTCGACGAGCTCGGCGAGCTGCCGCTCGCGGTGCAGAGCAAGCTCCTGCGCGCGCTCCAGGAGCGCGAGATCGCCGCGGTCGGGGGCGGCCGCGCGCGGAGGGTCGACTTCCGCCTGTGCGCCGCGACCTCGGTCGATCTCGACGAGGCGATCGCCGGCGGGAGGTTCCGCGAGGACTTCCTCCACCGCGTCCGCGGCGCGACGGTGCGTCTCGCGCCGCTCGACGAGCGACGCGACGAGATCCCGTTCCTGCTCGCGACCTCCGACAAGCTGAAGGACGCGAACGTCGCCCTCACCGCGCCCTTCGTCGAGGCGTGCATGCTCCGGCGCTGGCCGGGCAACGTGCGCGAGCTGCGCAACGCGCTGTCCCACGCCATGATCATGGCGTGCTCCGACCCGCAGCTCTCGGCGCCGCCCGGCGCCCCGATCGAGCTGCTGCCCAAGCACCTCCCGACGCACACGCGCGTGAGCGCGCCCCCGCCGCCGTCGCCGCCGTCGGCTGAGGAAGAGGAGCGCCGCCGGCTGGCCGACGCGTTCCGCCGAGCGAACGGCAACGGCGTCGAGGCGGCGAAGTCGCTCGGCATGGCGAGGTCGACGTTCTACGAGAAGCTCGACAAGTACGGGCTCAAGCGACGCTGA
PROTEIN sequence
Length: 438
LPRAPNETAEEPALSPDPPPPPPGLLLLWSGTDPTFVARPLHRPLKIGRSEDTDVCLGADRWVSSLHAEVFASLGSFVVRDLGSRHGTFVNGARVTEVSVEPGAVVRVGRTVMLLGPLPVGPATEIDGGYVVSAHQRRLRAAVSEAARLGIDLLILGDTGAGKEALARHYHACGPRARGPFVAWSAATFQPTTAEADLFGSRRGGFTGAVDREGLLAQADGGTLYLDELGELPLAVQSKLLRALQEREIAAVGGGRARRVDFRLCAATSVDLDEAIAGGRFREDFLHRVRGATVRLAPLDERRDEIPFLLATSDKLKDANVALTAPFVEACMLRRWPGNVRELRNALSHAMIMACSDPQLSAPPGAPIELLPKHLPTHTRVSAPPPPSPPSAEEEERRRLADAFRRANGNGVEAAKSLGMARSTFYEKLDKYGLKRR*