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GD18-4_B1_scaffold_346740_16

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 14119..14673

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCP7_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 174.0
  • Bit_score: 145
  • Evalue 3.40e-32
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 174.0
  • Bit_score: 145
  • Evalue 9.70e-33
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN96218.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 174.0
  • Bit_score: 145
  • Evalue 4.80e-32

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGGAGCGGTTCGTCGCCGGAGACGCGCGCGCTTTCGAGGAGCTCTACCGCGGGCTCGGGGCTCGTCTCTTTCCGTTCTGCCGCAGGCTCGCCGGTCGCCCGGACGATGCGGAGGAGCTCTTCCAGGAGACCTTCTTCAAGCTCCACCGCTCGCGCTCATCTTTCGCTCCGGGGACCAACGTCGTCCACTGGGCATACGCCATCGCGCGCACGGTTCACCTGGACCGCCTGCGCCATCGCAAGCGACGCGTCATCTTGGAAACCTCCGAATGGATCGAGGCGTTCCCTCAGACGGCGGGTGACTTCGCCTCTCCGGAGGCGAGCCTCTCCGCCAGTGAGCTCGGTCGTGTCGTCGACGAGGCACTCGCCGCGATGCCTGAAGCGCAACGCGCCGCGTTCGTCCTCACGAAGGAAGAGGGGCTCTCGGTGGCTGAAACCGCGTCCATTCTCGGCGCGACCGAAAACGCGGTGAAGCTCCGCGTGCTACGCGCCCGCGAGGACATCCACGCGGCGATGGTGAAGGCAGGGCTCGCACGGAAGGACACGAGGAAGTAG
PROTEIN sequence
Length: 185
MERFVAGDARAFEELYRGLGARLFPFCRRLAGRPDDAEELFQETFFKLHRSRSSFAPGTNVVHWAYAIARTVHLDRLRHRKRRVILETSEWIEAFPQTAGDFASPEASLSASELGRVVDEALAAMPEAQRAAFVLTKEEGLSVAETASILGATENAVKLRVLRAREDIHAAMVKAGLARKDTRK*