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GD18-4_B1_scaffold_1450852_30

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 36188..36901

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.6
  • Coverage: 101.0
  • Bit_score: 60
  • Evalue 3.40e-06
Ribonuclease E n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQ70_ALLVD similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 101.0
  • Bit_score: 60
  • Evalue 2.40e-06
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 101.0
  • Bit_score: 60
  • Evalue 6.90e-07

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Taxonomy

Allochromatium vinosum → Allochromatium → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGAAGCACCTTCCGCCTCCGCCGAGAGGAAGGCACCCGGTCCCCGGGACACCGCTGCCCCCGCCGCCGGATCGAGTGCACCCCGCGCACCATCAGTTCCTCGAGAAGCCATCGGTCGCGCCGGTGCTGCTCGACATCCAGAGCGACGAGTTCCGCAGCGGCCACGTCCTGCCCCGGTTCCCGCCGCTCGACGCGCTGCCCAGGATCGCGCAGCCCGAGGAGGTCCACCACCCGGACGGCGGACCGCCGCAGCGCGGGCGCGACCGTCGCCCGCTGCACCTCCTCGCGCTCGGCGCGGTGATGGTGTTCTTCGCCGCGATCGTGATCGATCGGCAGACGCACTCCGCCGCCGGCAGCGCTCAGTTCGTCGGCGAGGAGCTCGTGCGGACCGTCGACTGGCGCGCGGTCTTCCCGATCCAGCCGATGGTCGTCAAGACGCCCGCCGCGATCGCGACGGCACCGACAACCGGGCCGGCGACCACGGGGGTCTCCGCGGTCCCCAAGCCCGCCGTCGTCCCGCCCATCGTGATCACGGCGGCGCCCGATGTCTCGACGACGGCACCCGCCGTGGTCGGCCCCGCGCCGTCGATCGCGCCGTCGATCCAGGCGCCGGCGCCGCCCCCCAAGCCGAAGCCCGTCGGGACCGGCGGCGAGCCGGCGCCGAGCGAGCCGCAGCCCGATCCGACGCACGGCGTCGAGTCGCCGGGGTTCTAG
PROTEIN sequence
Length: 238
MKHLPPPPRGRHPVPGTPLPPPPDRVHPAHHQFLEKPSVAPVLLDIQSDEFRSGHVLPRFPPLDALPRIAQPEEVHHPDGGPPQRGRDRRPLHLLALGAVMVFFAAIVIDRQTHSAAGSAQFVGEELVRTVDWRAVFPIQPMVVKTPAAIATAPTTGPATTGVSAVPKPAVVPPIVITAAPDVSTTAPAVVGPAPSIAPSIQAPAPPPKPKPVGTGGEPAPSEPQPDPTHGVESPGF*