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GOSHIP-P18_170_1_13_153S_1017m_2_12160_5

Organism: GOSHIP-P18_170_1_13_153S_1017m_2_Alphaproteobacteria_48_9

near complete RP 43 / 55 BSCG 47 / 51 ASCG 7 / 38 MC: 1
Location: 3263..3442

Top 3 Functional Annotations

Value Algorithm Source
rpoH; alternative sigma factor RpoH similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 58.0
  • Bit_score: 89
  • Evalue 2.10e-16
RNA polymerase sigma 70 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003086CF8 similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 60.0
  • Bit_score: 93
  • Evalue 6.60e-17
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 60.0
  • Bit_score: 89
  • Evalue 1.00e-15

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Taxonomy

Methylobacterium populi → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGGCCGGTTCACGGTTACCTACAATCTCCAACGAAGGCGGCCTTGCACGCTACTTGCAAGAAATTCGTCGTTTCCCAATGCTCACGCAGAAGGAAGAGTTCACACTTGCTAAACAGTGGACTGAACAGGGTGATGTCGAAGCTGCCCATAAGCTTGTGACCTCCCATTTACGTTTAGTT
PROTEIN sequence
Length: 60
MAGSRLPTISNEGGLARYLQEIRRFPMLTQKEEFTLAKQWTEQGDVEAAHKLVTSHLRLV