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gwa1_scaffold_1015_7

Organism: GWA1_WWE3_42_12

near complete RP 40 / 55 MC: 2 BSCG 46 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(6512..7060)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC1_FULL_WWE3_42_13_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 366
  • Evalue 2.90e-98
RNA polymerase sigma factor sigw KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 186.0
  • Bit_score: 126
  • Evalue 7.90e-27
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 132
  • Evalue 1.00e+00

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Taxonomy

RIFOXYC1_FULL_WWE3_42_13_curated → WWE3 → Bacteria

Sequences

DNA sequence
Length: 549
ATGGATGATTATAAAAATAAAACTGACGAAGAGATCGTAGAGCTTATTAGTAAAGGTAACAAGGATTTATATGCCGAGATTATACGAAGGTACCAAACAAGACTTATGAGATACGCGCAATATTTAGTTGACGATTACGCCAAAGCAAGTGACGCAGTTCAGGAAAGTTTTATTAAGGCCTATATTAATTTAAACGGATTTAATACGAAAAAAAAGTTTTCAAGCTGGATTTACCGGATAGTTCATAACGAAGTCATAAATATAATTGACAAGCACAAGAAAAGTATCGTGTTTGATGAGAGCATTGACTTTGATAGTGGTATAAACGTGGAAGACTCTTATATGAAAGAGGAACTTGCAGCTCATACCCACGAGTGTCTGGATAGTATGGACTTAAAATACCGTGAGCCTTTATCGCTTTACTACTTAGAAGATAAGTCATACGAAGAAATCGGAGATATTTTAAGATTGCCGATAGGTACCGTAGCAACAAGAATTAACAGAGCTAAAGCTATAATGAGGAAAATATGTCAAACAAAAACGAGATAA
PROTEIN sequence
Length: 183
MDDYKNKTDEEIVELISKGNKDLYAEIIRRYQTRLMRYAQYLVDDYAKASDAVQESFIKAYINLNGFNTKKKFSSWIYRIVHNEVINIIDKHKKSIVFDESIDFDSGINVEDSYMKEELAAHTHECLDSMDLKYREPLSLYYLEDKSYEEIGDILRLPIGTVATRINRAKAIMRKICQTKTR*