ggKbase home page

gwa1_scaffold_153_67

Organism: GWA1_WWE3_42_12

near complete RP 40 / 55 MC: 2 BSCG 46 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(65945..66673)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase, 23S RNA-specific Tax=RIFOXYC1_FULL_WWE3_42_13_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 483
  • Evalue 1.70e-133
ribosomal large subunit pseudouridine synthase D KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 242.0
  • Bit_score: 410
  • Evalue 4.80e-112
Pseudouridine synthase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 152
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC1_FULL_WWE3_42_13_curated → WWE3 → Bacteria

Sequences

DNA sequence
Length: 729
GTGGAAGATCAAAAAATAAACATAATTCACGAGACCGATGATTATCTGGTAATCGACAAACCGGCTGGCTTAGTAGTTAACCGCTCAAATACGGCCAAAGGTATCACTTTGCAGGATATGATAGAGGAGAGAAGTCCGGTTGCAGGAGATGTAGACTCGGAAGAGGTTAGTCCCTCCGATTTTACTGCGCGTTCCGGTATAGCGCATAGACTGGATAAGGACACTTCGGGGATTTTGCTGGTTGCAAAAAACGCAGAATTTTTTGAAATCGTGCTAAACCAGTTCAAAGAACGTCAGGTAGAGAAGGAGTACGCAGCTATTGTTCACGGAAGCCCTGAGGAAGGCACTATGGAAATCGACGCACCCATCAAAAGAAACCCCAGAGACCCTATGAAGATGGCGATAGTGGCAGGAGGTAAAGAAGCACACACATTTGTAAGAAAGGTAAATGAGGTTGAAATTGCCGGAAACCGATTTTCATACCTTCAGGTAATTCCGTCAACCGGACGTACACACCAGATAAGGGTACATTTGGCAGCCGCTTTGTTGTATATTGCCGGGGACCCAATTTATTGTCCAAGAAATTTACTCACAATTGGCGAAGAGGCCTTTGGGAGGATGATGCTGCATGCGACCAAAATAAGGTTCTTTGACCCTCATTTACATGAATTTATACAATTTGAGTCGCCTTTACCCACGGAATATCTTCCATTCACTTCAAAAATATAG
PROTEIN sequence
Length: 243
VEDQKINIIHETDDYLVIDKPAGLVVNRSNTAKGITLQDMIEERSPVAGDVDSEEVSPSDFTARSGIAHRLDKDTSGILLVAKNAEFFEIVLNQFKERQVEKEYAAIVHGSPEEGTMEIDAPIKRNPRDPMKMAIVAGGKEAHTFVRKVNEVEIAGNRFSYLQVIPSTGRTHQIRVHLAAALLYIAGDPIYCPRNLLTIGEEAFGRMMLHATKIRFFDPHLHEFIQFESPLPTEYLPFTSKI*