ggKbase home page

gwa1_scaffold_2614_4

Organism: GWA1_OD1_47_11

partial RP 32 / 55 MC: 5 BSCG 34 / 51 MC: 2 ASCG 9 / 38 MC: 3
Location: comp(4759..7917)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 999.99
  • Bit_score: 1178
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=GWA1_OD1_47_11 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2082
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1177
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_47_11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3159
ATGCCGAAAAATAAAATTTCAAAGCAAGTCATACCGATAAAATTATTTTCTTCTCACCCAGGCGCTCTCACCGAGCAGCCCGACTTGCAGTTTATTCAAACCGATTCGTACAGGTGGTTTATTGAAAAGGGGTTAAGAGAACTCTTTGATGAGGTCTCTCCGATAACCGACTATTCCGGCAAGGAGTTAGAATTGCATTTTCTCGACTATCATCTAGACGAGCCAAAACACTCCGAGCAAGAGGCGCGCTTCAAGGGCGTCAACTATGAAGCCCCCCTGAGGGTGAAGGTACGCTTGACTGACAAATCAACCGGTAAGAAAAAAGAACAGGAAATATATCTTGGGGATATGCCGGTTATGACAGAGAAGGGCACCTTTGTTATTAGTGGGCATGAAAGAGTTGTTATCTCCCAGCTGGTACGCTCCCCAGGAATTTATTTCAAAGACAACTTATATAGAGGAAGAAAACTCTTCGGCGCCAAGGTTATTCCGAATCGGGGTACCTGGTTAGAAATTGAAACCGATCCCGATTACTCAATTGGCGTAAAAATTGACCGTCACCGCAAGGTTCCCATAACCACCCTCCTTAGAATATTCGGTTTTACCCAAGAGGAAATCAAAAAAACTTTTGGAGAAAAGATTGAGCCTACCCTCAAGAAAGATAGCGCGGAAGACTTAGAAAATTCGTATTTGGAGATATATAGACGTATTCGTCCCGGAGATTTGGCTACTCCAGAAGACGCGAAGAAGTTAATTGACTCAATGCTTTTTCAAGAAGAAAGGTATGACCTCTCGGATGTGGGAAGGTTCAAAGTCAATAAGCGTTTGAAGATTGAAAGCAAGGGGCCGTTGCTCACTAAGGGCGATATGGCAGCAGTGGTAAGTGAGATCTTCCGTCTTAACGATGCGCTTGATGCAGAGTCTGACGATATAGATCACCTTCAAAATCGTCGAGTAAGACCAATGGGAGAGTTTTTGAAAGATAGAATGCGCGTGGGGTTTGCGAGAATTAGGCGTATTGCGCAAGATCGTATGTCCACGATGGATCTCACGGAGGCGACTCCTACCTCCTTAGTTAACCCAAGGCCCCTAGTGGCTGTGGTCAAGGAGTTTTTTGCCTCTTCTCAGATGTCTCAATTTATGAGCCAGGTGAACCCGTTGGATGCGGTTGAGCACAAACGTATTTTAACTACCCTTGGTCCTGGAGGTTTAACTCGTGAGCGCGCCGGTATTGAAGTGCGCGATGTACACAGCTCATACTACGGGCGCATTTGTCCCATTCAAACTCCGGAGGGAGCCAATATCGGTTTGGTAAACCGCCTTGCAAACTACGCAAAACTCAACGAGTTTGGGTTTCTCATAACTCCCTACGCAAAAGTGGATGGGAGCAAACTTACTCAAAAAATTGTATGGCTCGATGCCGGGGAAGAAAATCAGTACAAAATTGCTTCAGCGAACACCCACTTTGATGAAAAGGGGATGATTATGGAAGATGTTGTAGAGGCTCGTATTGGAGGAGAACCTGGAACATGCAAAGCCAAGGACGTCGATTTTGTGGAGGTGGCCCCCGAGCAACTAGTGAGCGCCGCTACCGCCTTAGTGCCCTTCTTGGAACACGACGATGCTAACCGCGCCCTGATGGCATCAAACATGCAGCGTCAGGCGGTGCCATCCATCAGACCGGATGCTCCGTATGTGGGAACGGGCATGGAAGAGAAGGTAGCCATGGACTCGGGGTACTTGGTAATTTCAAAAACTGCCGGGGAAGTAACAGAAATTGACGCTGAAAAAATTGTAGTTAAGGACAGTGAGGGCAAGAAGCACATATATCCCCTGGAGAAATTCAAGATGAGCAACCAGAATATGGCTCAATCCCACATACCCCTGGTAAAAAAGGGCCAAAAGGTGAAGAAAAGAGAAGTTCTTGCCGATGGGCAATCAACGGACAATGGTACTTTGGCCCTAGGTCAGAACCTTGTGGTTGCTTTTGTATCTTGGGAGGGAGCAAACTTCGAGGACGCCATTATTCTCTCAGAAAGAGTCCAGAGGGACGGTCTTTATAGCTCTATCCATATAGAGGATTTTTATACGGATGTAAGGGACACAAAGCTCGGGCCGGAGTTAACTACTTGTGACATTCCTAATATCCCCGATGCCCAACTCGGAAACCTCGATGAAGAGGGTATCATCCGTATCGGCGCCCAAGTTGAGGGGGGAGATATATTAGTAGGGAAAATTTCTCCAAAAGGTGAAAGCGAGCTTACTCCCGAGGAAAGATTGCTACGCGCAATCTTCGGAGAGAAAGCCAGGGATGTAAAAGATTCATCTTTGGATCTGCCTCACGGGAAGAAGGGCAGGGTGGTTGGTATAAAGATCTTCTCAAGAGACAAGGGAGACAAACTTGACCCGGGAGTGATTTCACGCATCCACGTACAGGTAGCAACTATCAAGAACATTCAGGCTGGAGATAAGATGGCAGGGCGTCACGGGAACAAAGGGGTGGTTTCTCAAATTAGGCCCGTAGAAGACATGCCCTATCTTGAAGATGGTACGCCCGTGGATATTATCTTGAATCCTTTAGGCGTGGCATCGCGTATGAATATCGGACAAATTTTTGAGACCCACCTTGGGTGGGCAGCCATGAAACAAGGATACAGAGCAGTTACTCCGGTATTTTCCGGCGCAACCGAAGAAGAGATCAAAAACGAGTTGAAGGCAGCCGGCCTTCCTGATGACGGACAGGTTGTTTTGTACGATGGTCGTACTGGCAGGCCATTTGATCGCAAAGTAACGGTGGGAGTGATGTATATGATGAAGTTAAACCACCTAGTGACGGATAAAATCCACATGCGCTCCATCGGTCCGTACTCGTTGATCACCCAGCAACCCCTAGGAGGAAAAGCTCAACAGGGAGGTCAGAGATTTGGAGAGATGGAGGTTTGGGCGCTGGAGGGATACGGAGCTACCCACACTCTACAAGAGATGTCTACGGTGAAATCGGATGACGTTGTGGGGAGATCTTCTGTTTACGAATCAATTATCAGAGGAGAGAAAATTAAGAAACCGAACATTCCGGCTGCCTTTAACGTGATGATTAATGAACTCAAGGCGTTGGGATTGTCAGTCGAGAAAACAAGAGGGAAAGAAAATGCAAACTAG
PROTEIN sequence
Length: 1053
MPKNKISKQVIPIKLFSSHPGALTEQPDLQFIQTDSYRWFIEKGLRELFDEVSPITDYSGKELELHFLDYHLDEPKHSEQEARFKGVNYEAPLRVKVRLTDKSTGKKKEQEIYLGDMPVMTEKGTFVISGHERVVISQLVRSPGIYFKDNLYRGRKLFGAKVIPNRGTWLEIETDPDYSIGVKIDRHRKVPITTLLRIFGFTQEEIKKTFGEKIEPTLKKDSAEDLENSYLEIYRRIRPGDLATPEDAKKLIDSMLFQEERYDLSDVGRFKVNKRLKIESKGPLLTKGDMAAVVSEIFRLNDALDAESDDIDHLQNRRVRPMGEFLKDRMRVGFARIRRIAQDRMSTMDLTEATPTSLVNPRPLVAVVKEFFASSQMSQFMSQVNPLDAVEHKRILTTLGPGGLTRERAGIEVRDVHSSYYGRICPIQTPEGANIGLVNRLANYAKLNEFGFLITPYAKVDGSKLTQKIVWLDAGEENQYKIASANTHFDEKGMIMEDVVEARIGGEPGTCKAKDVDFVEVAPEQLVSAATALVPFLEHDDANRALMASNMQRQAVPSIRPDAPYVGTGMEEKVAMDSGYLVISKTAGEVTEIDAEKIVVKDSEGKKHIYPLEKFKMSNQNMAQSHIPLVKKGQKVKKREVLADGQSTDNGTLALGQNLVVAFVSWEGANFEDAIILSERVQRDGLYSSIHIEDFYTDVRDTKLGPELTTCDIPNIPDAQLGNLDEEGIIRIGAQVEGGDILVGKISPKGESELTPEERLLRAIFGEKARDVKDSSLDLPHGKKGRVVGIKIFSRDKGDKLDPGVISRIHVQVATIKNIQAGDKMAGRHGNKGVVSQIRPVEDMPYLEDGTPVDIILNPLGVASRMNIGQIFETHLGWAAMKQGYRAVTPVFSGATEEEIKNELKAAGLPDDGQVVLYDGRTGRPFDRKVTVGVMYMMKLNHLVTDKIHMRSIGPYSLITQQPLGGKAQQGGQRFGEMEVWALEGYGATHTLQEMSTVKSDDVVGRSSVYESIIRGEKIKKPNIPAAFNVMINELKALGLSVEKTRGKENAN*