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gwa1_scaffold_682_54

Organism: GWA1_OD1_46_11_plus_minus

partial RP 39 / 55 MC: 7 BSCG 39 / 51 MC: 9 ASCG 10 / 38 MC: 1
Location: 43991..45292

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU22142.1}; TaxID=1618732 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_46_11.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 433.0
  • Bit_score: 826
  • Evalue 1.90e-236
RpoD subfamily RNA polymerase sigma-70 factor KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 437.0
  • Bit_score: 386
  • Evalue 1.30e-104
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 384
  • Evalue 2.00e+00

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Taxonomy

GWA1_OD1_46_11_plus_minus → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGCCAAAAGCAACTCGTAAGAAAAAGGTAAAGAAATCTCTGAAGAGGAAAAGTCCAAAGAAAACAAAGAAAGTTGTTTCAAAAAAGCGCGTCAAGAAAACTCGGCCAGTAAAAAAGAGTTTTAAGAGAGTAAAAAAGGTAGTTAAAAAGAGGGCCACTAAGAAACTCTCAAGAAAAAAGCTTTCTTCTAAAGCGCGGAAGACCGCAGTCAAGAGCGTGCCTAGAAGGGGGTCTTTGAAGAATGAAGAACAACTCGCTGCTCTAATCACCCGGGGCCAGGAAAAGGGGTTTGTAACAGACCTAGAAATCCTTGAGTATTTTCCAAACATCGAGGATGACACCGATTTTCTGGATAAGATATACGAAGAGCTTGAACAAAACAGCCTCAAGGTAATCGAGGTGGAAACTCTTTTGGGAGAAGGGACGGGTGAAGTTACCGAAAAAGAGCTGAAAGAAGCGACAAACATTAAGGGCGCGTTGCCCGACAACGTACAGATGTACTTGAGAGAGATCGGGAAAACGCCCCTCCTTAAATCCCATGAAGAAAAAGAACTGGCTAAAAGAATCCTAAAGGGAGATGAGGCTGCGAGGCAGCAACTCATCAAGGCCAACCTAAGGTTGGTAGTTTCGATCGCTAAGAGATATGTGAACCGTAGCGCGCTTTCTATCTCAGATTTGATCCAAGAGGGGAATATCGGGCTCTTCAAGGCAGTTGAGAAGTTTGATTACACCAAGGGATTCAAATTCTCAACCTATGCCACTTGGTGGATCCGCCAAGCTATTACCCGTGCCCTCGCAGACCAGTCTCGCACTATCAGAATTCCGGTGCACATGGTGGAAACCATCTCCAAGTTTACTCAGGCTAAAAGAAAGTTAGCGCAACAGTTGGGGAGAGAGCCGATGGTGGAGGAAATAGCGTTGGAGATGGATTTGCCGGTGGAAAAGGTAAGGAACATTCAGAAGATCTCGCAGGAGGTGGTATCACTTGAATCTCCAATAGGGGATGATGATGACAAATCCACTCTTGCTGATTTCATCCAGGACGAGAAGAGCCTTACGCCGACTCAATTGACCTCCCAAGAACTTCTGAAGGATCAAATTAGGGATATTATCCAGGATTTAACGGAGAGAGAACGCAAGATCTTAGAGATGCGTTTCGGTTTGGATGATGGGGTAACCCATACCCTAGAAGAGGTGGGAAAGGTCTTCAGCGTCACGAGAGAGCGTATTCGTCAGATCGAGGCCAAGGCTTTGGAGAAAATAAGGCTGCACGAACAAGCCAAACGTTTAGTAGATTACTAA
PROTEIN sequence
Length: 434
MPKATRKKKVKKSLKRKSPKKTKKVVSKKRVKKTRPVKKSFKRVKKVVKKRATKKLSRKKLSSKARKTAVKSVPRRGSLKNEEQLAALITRGQEKGFVTDLEILEYFPNIEDDTDFLDKIYEELEQNSLKVIEVETLLGEGTGEVTEKELKEATNIKGALPDNVQMYLREIGKTPLLKSHEEKELAKRILKGDEAARQQLIKANLRLVVSIAKRYVNRSALSISDLIQEGNIGLFKAVEKFDYTKGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKFTQAKRKLAQQLGREPMVEEIALEMDLPVEKVRNIQKISQEVVSLESPIGDDDDKSTLADFIQDEKSLTPTQLTSQELLKDQIRDIIQDLTERERKILEMRFGLDDGVTHTLEEVGKVFSVTRERIRQIEAKALEKIRLHEQAKRLVDY*