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gwa1_scaffold_129_21

Organism: GWA1_OD1_47_10

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 2 ASCG 8 / 38 MC: 3
Location: comp(21580..22182)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:KKU50366.1}; TaxID=1618791 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_10.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 393
  • Evalue 1.90e-106
RNA polymerase sigma-70 factor KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 161.0
  • Bit_score: 74
  • Evalue 3.00e-11
RNA polymerase ECF-type sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 79
  • Evalue 1.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWA1_47_10 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGAAAAACTTACCTTGGCGGAAACTTATGCTATTATGAGTAAGTATTTACAGGTTAATACGTCTACTTACATGAAACCGCACTTGAAACAAGCGCAAAAAATCTTTGAAAAAGCCTATGCGGAGAATACAGACGCTCTGTTTCGCTTTGCTTATTACCGCATATCCGACCGGGAACAAGCGCTCGACATTGTCGGAGACGCATTTGTGCGCTTCTGGGAAGCTTTGGCAAAAGAGGAGGTCAGAGAACCGCGGGCATTCCTTTTCAAGGTGACCCGGAACCTGATTATCGACTGGTACCGCAAAAAGAAAAGCATTCCGGTGCAGGATTTTGGCGAAACGGCCGGGCCGGCGGAGAATGCGGAAAAATTTATGGACATGTTCGCGGGAGATTTGGCGGGCGCAGACGTGCTATCCGAAGCGAGACTAATCATCGAAAAAATCCGGACCTTGGAACCGATATACCGCGAGACGCTGTATTTCCGCTTTGTGGAAGAATTAAGCCCGAAGGAAATATCGGAAATTACCGGAGAGCACACCAATCTCATATCCGTACGGGTGAACCGGGGGTTAAAGTTGCTAAAAGCCGCCCTGCGCATATAA
PROTEIN sequence
Length: 201
MEKLTLAETYAIMSKYLQVNTSTYMKPHLKQAQKIFEKAYAENTDALFRFAYYRISDREQALDIVGDAFVRFWEALAKEEVREPRAFLFKVTRNLIIDWYRKKKSIPVQDFGETAGPAENAEKFMDMFAGDLAGADVLSEARLIIEKIRTLEPIYRETLYFRFVEELSPKEISEITGEHTNLISVRVNRGLKLLKAALRI*