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GWA1_OP11_39_11

GWA1_Levybacteria_39_13
In projects: GWA1  |  cpr-genomes  |  CPR-complete-draft  |  rifle_organic_carbon  |  cpr-dpann-all  |  all_cpr_genomes  |  ggK_CPR  |  ggdb_genomes

Consensus taxonomy: Levybacteria  →  Microgenomates  →  Bacteria

Metagenomic Context

Parent: GWA1 Unbinned

Properties

Avg. coverage: 12.65 Longest contig: 43.38 Kbp Bin length: 849.02 Kbp GC content: 38.54 %
Contigs count: 58 Features count: 899 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 43 / 55 MC: 3 BSCG 45 / 51 MC: 4 ASCG 8 / 38 MC: 1

Description

Good

Displaying items 1-50 of 58 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
gwa1_scaffold_1305 GWA1_OP11_39_11_7
Class: Levybacteria (75.56%)
45 36208 bp 39.64 12.66 88.60
gwa1_scaffold_386 GWA1_OP11_39_11_1
Class: Levybacteria (72.73%)
44 43384 bp 39.42 12.79 90.52
gwa1_scaffold_1067 GWA1_OP11_39_11_6
Class: Levybacteria (86.84%)
38 34136 bp 40.08 12.37 83.16
gwa1_scaffold_2985 GWA1_OP11_39_11_30
Class: Levybacteria (93.75%)
32 24505 bp 40.07 11.82 85.50
gwa1_scaffold_2075 GWA1_OP11_39_11_18
Class: Levybacteria (86.21%)
29 28347 bp 38.02 11.82 93.06
gwa1_scaffold_802 GWA1_OP11_39_11_4
Species: GWB1_OP11_39_7 (50%)
28 25253 bp 38.56 13.70 90.99
gwa1_scaffold_728 GWA1_OP11_39_11_3
Class: Levybacteria (62.96%)
27 27039 bp 34.93 13.47 96.07
gwa1_scaffold_960 GWA1_OP11_39_11_5
Class: Levybacteria (72%)
25 23359 bp 36.84 14.21 93.54
gwa1_scaffold_1309 GWA1_OP11_39_11_8
Class: Levybacteria (72%)
25 19138 bp 38.43 13.65 89.12
gwa1_scaffold_3225 GWA1_OP11_39_11_31
Class: Levybacteria (96%)
25 24518 bp 39.03 12.47 82.02
gwa1_scaffold_1551 GWA1_OP11_39_11_12
Class: Levybacteria (58.33%)
24 23213 bp 35.32 13.77 98.74
gwa1_scaffold_568 GWA1_OP11_39_11_2
Class: Levybacteria (66.67%)
24 30312 bp 34.74 14.25 94.49
gwa1_scaffold_1548 GWA1_OP11_39_11_11
Class: Levybacteria (69.57%)
23 19229 bp 38.30 12.90 98.09
gwa1_scaffold_2240 GWA1_OP11_39_11_21
Class: Levybacteria (65%)
20 16396 bp 39.69 13.10 85.47
gwa1_scaffold_2324 GWA1_OP11_39_11_23
Class: Levybacteria (70%)
20 13532 bp 38.44 13.92 89.23
gwa1_scaffold_2212 GWA1_OP11_39_11_20
Species: Microgenomates bacterium GW2011_GWC1_39_7 (63.16%)
19 13969 bp 38.22 13.50 86.23
gwa1_scaffold_2028 GWA1_OP11_39_11_17
Species: GWB1_OP11_39_7 (50%)
18 17389 bp 36.53 12.65 96.23
gwa1_scaffold_2309 GWA1_OP11_39_11_22
Class: Levybacteria (100%)
18 13570 bp 38.78 13.30 86.37
gwa1_scaffold_1597 GWA1_OP11_39_11_13
Class: Levybacteria (94.44%)
18 19289 bp 37.59 13.94 94.50
gwa1_scaffold_1657 GWA1_OP11_39_11_14
Species: RLO_OP11_Levybacteria_39_17 (55.56%)
18 23080 bp 34.51 13.92 99.77
gwa1_scaffold_1318 GWA1_OP11_39_11_9
Species: RLO_OP11_Levybacteria_39_17 (56.25%)
16 19093 bp 39.10 12.49 93.35
gwa1_scaffold_1879 GWA1_OP11_39_11_15
Species: RLO_OP11_Levybacteria_39_17 (50%)
16 15534 bp 35.73 13.28 95.60
gwa1_scaffold_1908 GWA1_OP11_39_11_16
Class: Levybacteria (68.75%)
16 19761 bp 39.03 12.84 93.15
gwa1_scaffold_2978 GWA1_OP11_39_11_29
Class: Levybacteria (81.25%)
16 12988 bp 37.57 12.44 92.05
gwa1_scaffold_2794 GWA1_OP11_39_11_26
Species: RLO_OP11_Levybacteria_39_17 (60%)
15 12306 bp 38.18 11.56 87.18
gwa1_scaffold_13505 GWA1_OP11_39_11_62
Species: GWA1_OP11_39_11 (80%)
15 10064 bp 41.47 9.72 73.84
gwa1_scaffold_2865 GWA1_OP11_39_11_27
Species: RLO_OP11_Levybacteria_39_17 (50%)
14 13444 bp 39.74 12.25 94.77
gwa1_scaffold_4421 GWA1_OP11_39_11_37
Class: Levybacteria (78.57%)
14 14104 bp 40.98 11.61 82.25
gwa1_scaffold_2894 GWA1_OP11_39_11_28
Species: RLO_OP11_Levybacteria_39_17 (61.54%)
13 16424 bp 37.15 13.13 98.58
gwa1_scaffold_11747 GWA1_OP11_39_11_56
Class: Levybacteria (69.23%)
13 9052 bp 37.47 11.48 84.88
gwa1_scaffold_2540 GWA1_OP11_39_11_25
Species: GWA2_OD1_45_21 (58.33%)
12 12688 bp 42.98 10.39 90.77
gwa1_scaffold_3628 GWA1_OP11_39_11_36
Class: Levybacteria (75%)
12 10115 bp 38.16 12.09 85.86
gwa1_scaffold_2531 GWA1_OP11_39_11_24
Class: Levybacteria (100%)
11 12705 bp 40.45 12.44 92.23
gwa1_scaffold_7324 GWA1_OP11_39_11_46
Class: Levybacteria (100%)
11 9363 bp 39.06 12.59 87.15
gwa1_scaffold_6554 GWA1_OP11_39_11_42
Species: GWA1_OP11_39_11 (72.73%)
11 9437 bp 38.38 12.65 92.09
gwa1_scaffold_4635 GWA1_OP11_39_11_38
Species: RLO_OP11_Levybacteria_39_17 (50%)
10 8645 bp 34.52 15.16 99.80
gwa1_scaffold_4966 GWA1_OP11_39_11_39
Species: GWA1_OP11_39_11 (60%)
10 15232 bp 42.25 10.67 89.28
gwa1_scaffold_4982 GWA1_OP11_39_11_40
Species: RLO_OP11_Levybacteria_39_17 (60%)
10 8242 bp 40.46 12.59 92.96
gwa1_scaffold_2181 GWA1_OP11_39_11_19
Species: GWA1_OP11_39_11 (50%)
10 16104 bp 42.18 11.54 89.46
gwa1_scaffold_7995 GWA1_OP11_39_11_50
Species: GWB1_OP11_39_7 (60%)
10 7178 bp 34.91 11.12 99.68
gwa1_scaffold_3573 GWA1_OP11_39_11_34
Species: GWA1_OP11_39_11 (66.67%)
9 10223 bp 39.24 13.03 94.23
gwa1_scaffold_7822 GWA1_OP11_39_11_49
Species: GWA2_OP11_nov_40_16 (55.56%)
9 6064 bp 40.55 12.37 81.73
gwa1_scaffold_6804 GWA1_OP11_39_11_43
Species: GWA1_OP11_39_11 (55.56%)
9 7006 bp 37.87 11.41 95.23
gwa1_scaffold_10140 GWA1_OP11_39_11_55
Species: GWA1_OP11_39_11 (100%)
8 5112 bp 39.03 12.50 88.62
gwa1_scaffold_8901 GWA1_OP11_39_11_53
Species: GWA1_OP11_39_11 (62.5%)
8 6398 bp 39.89 9.73 89.61
gwa1_scaffold_7558 GWA1_OP11_39_11_48
Species: GWA2_OD1_45_15_partial (100%)
8 6214 bp 41.49 12.79 86.95
gwa1_scaffold_12666 GWA1_OP11_39_11_59
Species: GWA1_OP11_39_11 (100%)
8 5338 bp 43.84 7.14 95.04
gwa1_scaffold_12552 GWA1_OP11_39_11_58
Species: RLO_OP11_Levybacteria_39_17 (57.14%)
7 6951 bp 37.92 12.60 94.43
gwa1_scaffold_12993 GWA1_OP11_39_11_61
Class: Levybacteria (100%)
7 6696 bp 39.67 12.23 72.04
gwa1_scaffold_3575 GWA1_OP11_39_11_35
Species: GWA1_OP11_39_11 (100%)
7 10218 bp 39.80 15.56 88.84
Displaying items 1-50 of 58 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.