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gwa1_scaffold_8036_4

Organism: GWA1_OD1_33_6_very_partial

partial RP 29 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38 MC: 1
Location: 3673..6930

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2132
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 999.99
  • Bit_score: 1004
  • Evalue 2.60e-290
DNA-directed RNA polymerase subunit beta' similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1001
  • Evalue 2.00e+00

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Taxonomy

R_RIF_OD1_06_33_13 → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3258
ATGCGAGTTATAGACCTAGAATCAATAAGAGTTAAAATAGCTTCGCCTGAAGAGATTTTAACTTGGTCTCATGGTGAAATAACAAAACCTGAAACCATAAATTATAGAACTCAAAAACCTGAAAAGGATGGTCTTTTTGATGAGAAAATTTTTGGCCCTGAAAAAGATTATGAATGCGCCTGCGGTAAATATAAAAGAATACGATATAAAGGAGTTGTTTGTGATAGGTGCGGAGTGGAGGTTACCAAGTCTCAAGTAAGAAGAGAAAGAATGGGGCATATTAAATTAGCCACTCCGGTTTCACATATTTGGTATTTAAGGGGGGTACCATCAAGAATGGGATTGGTATTAAATAAGTCTAGTCAGCAATTAGAAAAGGTTATTTATTTTTCTTCATATATTATTACTAAAATTAACAATGAAGCAAGACAAACGGTTTTGGATGCAGTGGAGCAGGAATTTAAAATAAAAGTTAAAAAAGAAACTACAGAAGCTAAAAAACAAGAATTAAAACAACTGAAAGAAAAAGTTAAAGAAGAAATATTAGAAATAAAAACTTTAAGAATTTTATCTGAAGTTGCTTACCACGATTTATCTTTAAAATACGGTGAAATATTTGAAGCTGGTACAGGAGCTGAAGTGATAAGAAACTTATTTTCTAAAATTGACTTAAAAATAACTACCGACGAATTAGTAAAAGAAAGTATTGAAGCGCCATTAATTTTAAAGAAAAAGATATTAAGAAGGTTAAAACTTTTTCAAGGAATGTTAAAAGCCAAGGTAAGACCTGAATGGATGTTTATGGATGTATTGCCAGTATTACCTCCAGATTTAAGGCCTATGGTTCAGTTAGATGGGGGAAGATATGCTTCTTCTGATCTTAATGATTTATATAGAAGGGTAATTAACAGAAATAATAGATTAAAATACCTTCTTGAAATTTCGGCGCCTTCAGTAATTGTAAGGAATGAAAAAAGAATGTTGCAAGAAGCGGTTGATGCGTTAATCGATAACGATATGCGTAAGGGTGTTACTACTACCGCCACTACCGGAGGCAAAAGATTATTAAAATCTCTTGCAGCAATATTGGCTGGAAAACAGGGAAGATTCAGACAAAATCTTTTAGGTAAGCGAGTTGATTATTCTGGAAGATCAGTAATTACAGTAGGGCCTGAATTGAAGTTTTCCCAGTGCGGATTGCCAAAAAAATTGGCGTTGGAAATATTTAAGCCTTTTGTAATTAAAAGAATTTTAGATAAGGAATTAGCATATAATATAAGAGGAGCAACTAGGTTGATTGATGAAAAGGTTCCTGAAGTATGGGCAATTTTGGAAGAAATTGTAAAAGATAAATTAGTGTTGCTTAACAGAGCTCCAACCTTGCATAGGTTAGGAATCCAAGCATTTCACCCAGTTTTAACCGAAGGAGAAACAATAAAATTACATCCGCTTGCTTGCGAGGCTTTTAATGCAGATTTTGATGGAGACCAAATGGCGGTATATTTACCACTCTCTCAAGAAGCTCAAAAAGAGGCTAGGGAAATTATGCTTTCCTCATTAAATCTTTTGAGGCCAGCCACTGGTTTGCCGGTTATTGGTCCATTCCGAGATATTGTGCTTGGATGTTATCTTATGACAAAATTAAAAGAGCCCTTCGACATAGCTCAGGGTAAACCAAAAGAAGTAAAGTATTATTCAAGTGAGTCGGAAGTTATTACTGCTCACGAATATGGATTCTTAGGTTTAAATGAAAAAATAAAAGTCCCAAATCCAAAATCAGAAGCTCATGAAATAATTGAAACTTGTGTTGGCAGGCTTATTTTAAATTCAAATTTACCGAAAACTTATCCATATGTAAGTAAGCTTATAGATAATAAGTCATTAAAAGCTTTAATCAGGGATGTTATTGAAAAATACCCAGGACAAGAATCTATAGATGTGTTAGATAACATTAAAAGAATGGGTTTTGAGTATTGTACTTTATCTGGAATAAGCTGGGGTATGGATGATTTGATAGTTCCAAAAGAAAAAGGAAAACTTATTGACGAAGCAGAAAAAGAAGTTGAAAAAATTGAAGCGCATTATGAAAAAGGGCTTTTGAGCCATGATGAAAAAACTTCTCAGAAAATTTTGATTTGGCAAGGCGTTAAAACAAAACTTGAAGCATTATTAAAAACAACTTTACCTGAAGACGGTACGGTGTTGTCTATTATTAATTCTGGAGCTAAGGGAACTTGGGCTCAGCCAGTGCAGATGGCAGGAATGAAGGGGCTTGTAAATAATCCTTCGGGAGACATTATTGAGTTGCCTATTAAGTCATCTTTTTCAGAAGGATTTAATGTATTGGAATATTTTATTTCTACTCATGGAGCCAGAAAAGGAACCGCTGATACTGCGTTAAGAACTGCTTCGGCGGGATACTTAACAAGGCGACTTGTTGATGTTGCCCACGATATGATTGTTTCAGAAGAAGATTGTAAAGATAAGAAAGGTATTGTGGTTTTGAAAAAAGAAGCCGAAGATATAGAACAAAACTTCACCTTTAAATTAGTTGGAAGATTTTGTTTAGAAGACATTGTTTCAAAAATTAAGCCCAATGCGGTTATTGTAAAAAAGGGAGAGTTGATTAATTGGCAGCAAGCGGGCGAAATTATTAAAGAAGAAATAGATAAAGTAATAGTTAGGTCTCCTTTAAGTTGCAAAAGCATCAGGGGGGTTTGCCAAAATTGTTATGGTTGGGACTTAGGCAGGAATAGATTGGTAAAAATCGGAGAGGCGGTTGGAGTTGTTGCAGCTCAATCAATTGGTGAACCGGGAACTCAGCTTACTTTAAGAACTCATCACTTGGGAGGTATTGTTGGCGCGGGAGATATTACTCAAGGTTTGCCAAGAATTGAAGAAATTTTTGAATCAAGAGCTCCAAAAGGTGAAGCAGTGATGTCTTTAACTGAAGGAAAAGTTATAAAGATTGATGAAGAAAAAAGAGTTATTACTATTCAACCTTCAAAAGAAGCCTCAGATAAAAAAGAGAAAAAATCATCTATTAAAGAAAGTGGCGCTAATAAAAAACCACTTCCAATGGATTATAAAATACCTAATAGGGTTGCCATTCTTGTGGCTTCGGGAGATGAAGTAAAAGAGAATCAACCTTTGTGTGCTGGTAACCTAGATTTAAAGAAGCTTTATAAATCAGGAGGCCTAGAAGAAACTCAAAGATATATTTTAAAGGAAGTGCAAAGAATTTATTCTTCCCAGGGA
PROTEIN sequence
Length: 1086
MRVIDLESIRVKIASPEEILTWSHGEITKPETINYRTQKPEKDGLFDEKIFGPEKDYECACGKYKRIRYKGVVCDRCGVEVTKSQVRRERMGHIKLATPVSHIWYLRGVPSRMGLVLNKSSQQLEKVIYFSSYIITKINNEARQTVLDAVEQEFKIKVKKETTEAKKQELKQLKEKVKEEILEIKTLRILSEVAYHDLSLKYGEIFEAGTGAEVIRNLFSKIDLKITTDELVKESIEAPLILKKKILRRLKLFQGMLKAKVRPEWMFMDVLPVLPPDLRPMVQLDGGRYASSDLNDLYRRVINRNNRLKYLLEISAPSVIVRNEKRMLQEAVDALIDNDMRKGVTTTATTGGKRLLKSLAAILAGKQGRFRQNLLGKRVDYSGRSVITVGPELKFSQCGLPKKLALEIFKPFVIKRILDKELAYNIRGATRLIDEKVPEVWAILEEIVKDKLVLLNRAPTLHRLGIQAFHPVLTEGETIKLHPLACEAFNADFDGDQMAVYLPLSQEAQKEAREIMLSSLNLLRPATGLPVIGPFRDIVLGCYLMTKLKEPFDIAQGKPKEVKYYSSESEVITAHEYGFLGLNEKIKVPNPKSEAHEIIETCVGRLILNSNLPKTYPYVSKLIDNKSLKALIRDVIEKYPGQESIDVLDNIKRMGFEYCTLSGISWGMDDLIVPKEKGKLIDEAEKEVEKIEAHYEKGLLSHDEKTSQKILIWQGVKTKLEALLKTTLPEDGTVLSIINSGAKGTWAQPVQMAGMKGLVNNPSGDIIELPIKSSFSEGFNVLEYFISTHGARKGTADTALRTASAGYLTRRLVDVAHDMIVSEEDCKDKKGIVVLKKEAEDIEQNFTFKLVGRFCLEDIVSKIKPNAVIVKKGELINWQQAGEIIKEEIDKVIVRSPLSCKSIRGVCQNCYGWDLGRNRLVKIGEAVGVVAAQSIGEPGTQLTLRTHHLGGIVGAGDITQGLPRIEEIFESRAPKGEAVMSLTEGKVIKIDEEKRVITIQPSKEASDKKEKKSSIKESGANKKPLPMDYKIPNRVAILVASGDEVKENQPLCAGNLDLKKLYKSGGLEETQRYILKEVQRIYSSQG