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gwa1_scaffold_8838_4

Organism: GWA1_OD1_33_6_very_partial

partial RP 29 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38 MC: 1
Location: comp(3633..4430)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKP54713.1}; TaxID=1618781 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_33_6.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 265.0
  • Bit_score: 532
  • Evalue 4.50e-148
RpoD family RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 141.0
  • Bit_score: 77
  • Evalue 6.10e-12
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 78
  • Evalue 3.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWA1_33_6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGACAAGTTTTAGAGAAAATTCCTCTAATGGATTAATAAATAAAGATATTGAAAATGGCGATTTTTTAAGTAAAAGAAAACTTGAAAGAAAAAAATACCACGCCGATCTATTCGCATTGGGACAAGAAATTATGAGGTGTATTAATGGAAATAACATAGAAGAAGCCAAAAAAAAGTTTGATGAATTTACTATTAAAATCTCGCCAGAAATAAAATTGAATTTAAATCTGTATATTAAGAGGATTAGGGATGATAAATACAAGGAATTTGGTAATATTGGCACTCATATCGACTATGAAAGTTGCCTAGATGAAAGCTTGCAAGAATATTATCTTTATCTTTGGAAATACCGCGATAAGCGGTTTGACCGCTTATTTAATCAAGATTTCCCATCTAATATAACCAGGCTTATATTAAACGATACTAAAAGAATTTTTGTGAATAATATACATAAGCTACACAATAGGATAAAGCAGACCAAAAATACTCCCATTGGAGACATTATTGATCAACAACCGCAACCGGGAGAAATTTCAGCCATTGAATCCCTTGAGTTGATTATTGCATTAGTAAAAGAAAAACTAGGAGAGATGAAAGATGGTATTTTTAGTTATCGAAATATCGAAATAATTAAAATGAGATTTGGATTAGGGGATGATGGTAGGGCCTATACGCTTAAAGAAATAGGGGAAAAATTTGAAATTTCGAGTGAAAGAGTCCGCCAAATAGAGGTTTTGGTATTAAGAAAAATGAAACTAAATCCGGCACTGATTAAAACATATAAAGAATATTTTTAG
PROTEIN sequence
Length: 266
MTSFRENSSNGLINKDIENGDFLSKRKLERKKYHADLFALGQEIMRCINGNNIEEAKKKFDEFTIKISPEIKLNLNLYIKRIRDDKYKEFGNIGTHIDYESCLDESLQEYYLYLWKYRDKRFDRLFNQDFPSNITRLILNDTKRIFVNNIHKLHNRIKQTKNTPIGDIIDQQPQPGEISAIESLELIIALVKEKLGEMKDGIFSYRNIEIIKMRFGLGDDGRAYTLKEIGEKFEISSERVRQIEVLVLRKMKLNPALIKTYKEYF*