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gwa1_scaffold_1920_35

Organism: GWA1_OD1_60_11_partial

partial RP 29 / 55 BSCG 31 / 51 ASCG 3 / 38
Location: comp(29767..30990)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_OD1_60_15_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 407.0
  • Bit_score: 772
  • Evalue 3.00e-220
RNA polymerase, sigma 70 subunit, rpod subfamily KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 403.0
  • Bit_score: 378
  • Evalue 3.40e-102
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 380
  • Evalue 3.00e+00

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Taxonomy

RLO_OD1_60_15 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGCCCAAAAAGGCAGCAAAGAAGGCCACGAAACGGCCCTCTTCTTCGGTGAAACGAGCCCGTAAAACCTCCAGGAAACTCGCCAAGCGGGGGTCTTCGCGCGCGCTCAAAAAGGGCAAGGCCGCCGCGTCGCGCTCCGTGTTCGACGAAAGGAAGCTCGGCGAGCTTATCCAGCGCGGCCGGCCGCGCGGCTTCGTGACGGACACGGAGATCCTCTATTATTTCCCGAACATCGAGAAAGACATCTCTTTCCTCGAGAAGATCTACGAGCGGCTCGAGGCGGCCAACATAAAAGTGATCGAGACGAGCCAGCTCATCGAGGTGCCCAGAGGCAAGGAAGAGGTGAGCGAGAAGGAGCTTCTCGAGGCGACCCGCATCACGGGCGGCACGGCCGAAGTGCCGGATGCGGTGCAGATGTACCTGAAGGAGATCGGCAAGACGCCTCTCCTAACCGCGCAGGAAGAGCGCGATCTTGCAAAGCGTTCGGAAAAAGGCGACGAAGAGGCGCGCCAGCGGCTCATCACCGCGAACCTCCGCCTCGTGGTCTCGATCGCCAAGCGCTACGTGAACCGCACGCCGAACTTGAGCATCTTGGACCTTATCCAGGAGGGCAACATCGGTCTCTCGCGGGCCGTCGAGAAGTTCGACTACCGCCGCGGCTTTAAATTCTCGACCTACGCGACCTGGTGGATCCGTCAGGCCATCACCCGCGCGCTCGCGGACCAGTCGCGCACCATTCGCATCCCCGTGCACATGGTGGAGACCATCTCCAAGTACACGCAGGCAAAGCGGCGCTTGATGCAGGAGCTCGGCCGCGAACCCTTGCCCGAAGAGATCGCCATCGAGATGGGCATCAGCGTGGAGAAGGTGCATCACATCCAGAAGATATCGCAGGAGGTCATTTCGCTCGAATCGCCCGTGGGCGATGACGATGACGATTCCTCGCTCTCCGAGTTCATCCAGGACGAGCGGAACCTTACGCCCGCGCAGATCGCGTCGCAGGCGCTCCTCCGCGACCGCATTCACGACATTCTCATCGACCTCTCGGACCGCGAGCAGTCGATCCTGCGGCTTCGCTTCGGCCTTGAGGACGGTGTTACCCATACGCTCGAGGAGGTAGGCAAGGTGTTTAACGTGACGCGCGAGCGCATTCGCCAGATCGAGGCCAAGGCGCTCGAGAAGGTCAAGGAACACAAGAAATCGGCCGGGCTGGAGAGTTATTGA
PROTEIN sequence
Length: 408
MPKKAAKKATKRPSSSVKRARKTSRKLAKRGSSRALKKGKAAASRSVFDERKLGELIQRGRPRGFVTDTEILYYFPNIEKDISFLEKIYERLEAANIKVIETSQLIEVPRGKEEVSEKELLEATRITGGTAEVPDAVQMYLKEIGKTPLLTAQEERDLAKRSEKGDEEARQRLITANLRLVVSIAKRYVNRTPNLSILDLIQEGNIGLSRAVEKFDYRRGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYTQAKRRLMQELGREPLPEEIAIEMGISVEKVHHIQKISQEVISLESPVGDDDDDSSLSEFIQDERNLTPAQIASQALLRDRIHDILIDLSDREQSILRLRFGLEDGVTHTLEEVGKVFNVTRERIRQIEAKALEKVKEHKKSAGLESY*