ggKbase home page

gwa1_scaffold_882_56

Organism: GWA1_OD1_44_9_plus

partial RP 36 / 55 MC: 6 BSCG 39 / 51 MC: 9 ASCG 6 / 38 MC: 1
Location: comp(44621..45340)

Top 3 Functional Annotations

Value Algorithm Source
protein RluF; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_43_27_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 475
  • Evalue 5.90e-131
rluF; protein RluF KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 233.0
  • Bit_score: 186
  • Evalue 6.50e-45
Ribosomal large subunit pseudouridine synthase F similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 203
  • Evalue 4.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_09_43_27 → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAAACAAGAACCTCTTATCTATCCTGTACGCCTCAACCGATACCTCGCCCACAAGGGGCTCGCAACACGTCGCGGTGCTGATGAACTTATTGAAAAGAAACTCGTAACTATCAATGGCACGGTTGCAAAACTCGGCGATAAAATTAACGAGAAAGATGTTGTGATCGTAGCTCCATCTGTACTTGCTAGCATCTCAAAGCAGTATCGCTATATCGCCTACCACAAACCGTGTGGTGTTTCCACAGATGTTCAACCAGGATCACAGTCAATCTCTTCTGAACTTCCAGCACTTCGCGGTCTCTTCCCTCTTGGTCGCCTCGACAAAGCATCACACGGACTTATTATCCTTACCAACGATGGGCGCCTGACCGAACGTCTTCTTCATCCTTCGCACCATCACGAAAAGGAATACCTCGTGCGTGTTGATAAGCCTATTACGGATTCATTCATTCGCCATCTTGAACATGGTATTCTCATTGAAGGATATAAAACAAAACAAGCAAAGGCGCGACGCTCTGGCGAAACTATTTTTTACATTACGATTGTCGAAGGCAAGAAGCACCAGATCCGCCGTATGTGCACCGCTGAGGGATACCAAGTCAAGGACCTCAACCGTGTGCGTGTGATGAACATCAAACTCGGTACCCTCAAAGAGGGTGCTTATCGATCTATTGAAAAAGACGAACTCTCAACGTTCCTCAAAAACATCGGGCTTTAG
PROTEIN sequence
Length: 240
MKQEPLIYPVRLNRYLAHKGLATRRGADELIEKKLVTINGTVAKLGDKINEKDVVIVAPSVLASISKQYRYIAYHKPCGVSTDVQPGSQSISSELPALRGLFPLGRLDKASHGLIILTNDGRLTERLLHPSHHHEKEYLVRVDKPITDSFIRHLEHGILIEGYKTKQAKARRSGETIFYITIVEGKKHQIRRMCTAEGYQVKDLNRVRVMNIKLGTLKEGAYRSIEKDELSTFLKNIGL*