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gwa2_scaffold_6618_18

Organism: GWA2_OD1_40_14

near complete RP 39 / 55 BSCG 43 / 51 MC: 1 ASCG 11 / 38
Location: comp(15838..16317)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 319
  • Evalue 2.80e-84
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 26.4
  • Coverage: 159.0
  • Bit_score: 86
  • Evalue 7.90e-15
RNA polymerase sigma-70 factor, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 94
  • Evalue 3.00e+00

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Taxonomy

R_RIF_OD1_10_39_10 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAACTTAGATAAAGACGCTGTCAGCAAGCTGTGGAACACTCTCACGCCCAAGCTATATGGGTATCTTATAAATACACTAAGAGACCGTGATTTGGCAGATGACATTCTACAGACCACATGGCTTAAAGCCATAGAAGTTCTTACCCGCTTTAATAAGCGCGGGGCTGGATTTTCAGCTTGGATATTTGCTATTGCTAGAAATGAAATGAAAATGCACTGGCGAAAAAGCAGTCGTGAAATACGATATGACGAGACACTTCACGATAGTTCCGATATTGACTCTAGAGTAGAAGATAAAATCCTTGTAGACCAGATTCTACAAAAACTTTCCGAGGACGATAGAGAATTAATACGCTTACGCTATATTGGAGGCCTTCCCCTCGGTGAAATAGGAAGGGTTCTTAAAATAAATCCTATTGCTGTCCGAGTGAGAATGCATCGAGCATTGGTTCATGCACGCACTATATTCAAAAATTAA
PROTEIN sequence
Length: 160
MNLDKDAVSKLWNTLTPKLYGYLINTLRDRDLADDILQTTWLKAIEVLTRFNKRGAGFSAWIFAIARNEMKMHWRKSSREIRYDETLHDSSDIDSRVEDKILVDQILQKLSEDDRELIRLRYIGGLPLGEIGRVLKINPIAVRVRMHRALVHARTIFKN*