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GWA2_Bacteroidetes_42_15_gwa2_scaffold_954_36

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(47934..48524)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 id=2178113 bin=GWE2_Bacteroidetes_42_39 species=Parabacteroides merdae genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 397
  • Evalue 9.20e-108
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 397
  • Evalue 1.30e-107
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 185.0
  • Bit_score: 139
  • Evalue 7.40e-31

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGGGCGCAAATAATCCAACTCAGGAGCTTTTCTTATTTGAGGAGATGAAAAGAGGAAAGGAATATGCCTTTGACTTCTTCTTTAATTATTATTATTCCGGATTATGTGTCTATGCCCAAAAAGTGATCCTGCTTCGCGAAGAAGAAGTAAAAAATCTGGTACAGGATGTCTTTCTCAAATTCTGGCATGATCGTGAAAAATTAACCATACATACTTCAGTTCGATCTTATTTGTTTGTTTCGGTAAAAAACCGGTGCTTCGATTTCATAAGAAAAAGTAATAAAGAACAGAAATTTCAGGAACTTACTGATAAAGATGATATTGAAGACAACACATTTGATAGCTATGTTTTATCAGAGCTTGAAGCCCTCTTTAATGAAAGCTTGAAAAAACTGCCTGAACGCTGCCGTGAAATTTTTGAGCTCAGCCGTTTTCAGGGACTTAAAAACGGAGAAATAGCTGCGAAGTTAAATCTGTCGGAGAAAACTGTTGAAAATCAGATGACAAAAGCTCTTCGGATTTTAAGAACAGAGCTTCGGGATTACTTACCTTTATTCCTGTTGTTTGAATATTTCCATTTCTTCAGGTAA
PROTEIN sequence
Length: 197
MGANNPTQELFLFEEMKRGKEYAFDFFFNYYYSGLCVYAQKVILLREEEVKNLVQDVFLKFWHDREKLTIHTSVRSYLFVSVKNRCFDFIRKSNKEQKFQELTDKDDIEDNTFDSYVLSELEALFNESLKKLPERCREIFELSRFQGLKNGEIAAKLNLSEKTVENQMTKALRILRTELRDYLPLFLLFEYFHFFR*