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GWA2_Bacteroidetes_42_15_gwa2_scaffold_1202_3

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(1353..1943)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor id=2033425 bin=GWA2_Bacteroidetes_42_15 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 390
  • Evalue 8.60e-106
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 390
  • Evalue 1.20e-105
RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 192.0
  • Bit_score: 168
  • Evalue 2.50e-39

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGACCGGAAATGAAAAATATTTGTTCGAAAGAATAAGAAATGGCGATGAAGCTGCATTTAAAGTCATTTACAACAAATATGCCCCTCGTTTGTACTACTTTATTTATGAGTACATTCCGTTGACCGATATTGTCGAAAATATTATTCAGGATACCTTGATGGCTCTTTGGAATAAAAAATCGGAACTGGCTGACAATACCAATCTGGGAGCCTACCTGTTTACCATTGCAAAAAACAACTGCCTTTATAAACTTCGCGATCAGCGATACCACAAAAAGATATTTGAATTGTCCGATGTCGACAGTTCAGAATTAAAAGCAAATATGGATGCTTTGGTCATACTCGATACTTCGCAGCTTGCATTTCTGGAGATCGAACAGATTATTGAAGAAACGCTTGCACAATTACCCCCGCAATGTAGAACCGTCTTTTCAATGAGCCGTTTTGACGATAAAAAAAACAAGGATATTGCCGAAGAATTGGGCATTTCGGTAAAAGCAGTCGAAGGGCACATCACCAAAGCATTAAAACTATTTCGTAGTACCTTAAAAGATTATCTGCCCATAGTTGCCTATTTATTTATTCCCTAA
PROTEIN sequence
Length: 197
MTGNEKYLFERIRNGDEAAFKVIYNKYAPRLYYFIYEYIPLTDIVENIIQDTLMALWNKKSELADNTNLGAYLFTIAKNNCLYKLRDQRYHKKIFELSDVDSSELKANMDALVILDTSQLAFLEIEQIIEETLAQLPPQCRTVFSMSRFDDKKNKDIAEELGISVKAVEGHITKALKLFRSTLKDYLPIVAYLFIP*