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GWA2_Bacteroidetes_42_15_gwa2_scaffold_1202_18

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(29259..29822)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily id=2003914 bin=GWE2_Bacteroidetes_42_39 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 373
  • Evalue 1.40e-100
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 373
  • Evalue 1.90e-100
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 180.0
  • Bit_score: 124
  • Evalue 2.40e-26

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGGAAAGGTGATTCACATATTTGGGATCAGTTGAAATCCGGGGATAAGCAATCATTCGAGATGCTTTTTAAAACCTACTATCCTCAATTGTGCCTTTTTTCAAAACAGTATACCAAAGACATGGACGATGCCCGGGAAGTTGTTCAGGAACTGTTTGTTTATCTTTGGGAAAACAAGGAAAAAATCAGAAATATTGATTCAGTAAAATCGTACATATTCACTGCATTAAAATTTAACAGCATCCGCAAATACAACGACAGTTCCTCTATGACAATTGAAATTTTTGATGTTTCTGAAGAAAAATTCATCACCGATTTTCACGATGAAATAGAATATGCAGAATTACAACATGCTATTTTTCAGACCATAGAACTGTTGTCACCCCAGTGCCGGAGAATTTTTGAGATGAGCCGGTTCGAAAAACTCACCTATAAAGAAATAGCTGACAGTCTGGACATATCAATCAAAACAGTTGAAGCACAAATCAGCAAAGCCCTTCGCAACCTTCAAAAAATGCTCAACAAATATCTCATCGCGATCTTTCTCTTTTTAATCCCCTGA
PROTEIN sequence
Length: 188
MRKGDSHIWDQLKSGDKQSFEMLFKTYYPQLCLFSKQYTKDMDDAREVVQELFVYLWENKEKIRNIDSVKSYIFTALKFNSIRKYNDSSSMTIEIFDVSEEKFITDFHDEIEYAELQHAIFQTIELLSPQCRRIFEMSRFEKLTYKEIADSLDISIKTVEAQISKALRNLQKMLNKYLIAIFLFLIP*