ggKbase home page

GWA2_Bacteroidetes_42_15_gwa2_scaffold_701_22

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(37773..38351)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit id=1911064 bin=GWE2_Bacteroidetes_42_39 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 193.0
  • Bit_score: 390
  • Evalue 8.40e-106
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 390
  • Evalue 1.20e-105
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 192.0
  • Bit_score: 286
  • Evalue 4.80e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGCCTGAGCAAATTTCCAAAATACTGAAAGACGACCGAAATAGTTTCAAGAATATCTTCCATGATTGTTATCAGCCTCTTTGTCATTTGAGCATGGGTTATCTCAAAGATGAAAATGAAGCAAAAGGGGTTGTACAGGATGCTTTTTTGAAATTGTGGGAAATAAGGCATGACCTCAGTGAAGACTCAAATATCCGAAACTTTTTATTTACATTGGTAAAAAATAATTGTTTGAACATCTTGAAACGCAGGCAGATTCTCTTGAAACATCATGAGAAAATCAGATGGATGGAAATGCACTATCAATATGAAAGTTTGAAGAGAATAGACAACAATTACATGGAATTCAATGAATTGAAAGAGAAGATAGATATTGCAATCAGGAACCTCCCGGAATCGTGTCGTGTTGTTTTTGAAATGAGCAGGTTTGAGGAACTAAAAAACAGGGAGATAGCCGAAAAACTGGGTGTTTCGCAAAAAACAGTGGAAGCTCACCTTACAAAAGCATTAAAGATTCTTCGAAACGATTTGAAAGATTACCTTCCAATAATCACAGTGATTACCAAAATTCTGAACTGA
PROTEIN sequence
Length: 193
MPEQISKILKDDRNSFKNIFHDCYQPLCHLSMGYLKDENEAKGVVQDAFLKLWEIRHDLSEDSNIRNFLFTLVKNNCLNILKRRQILLKHHEKIRWMEMHYQYESLKRIDNNYMEFNELKEKIDIAIRNLPESCRVVFEMSRFEELKNREIAEKLGVSQKTVEAHLTKALKILRNDLKDYLPIITVITKILN*