ggKbase home page

GWA2_Bacteroidetes_42_15_gwa2_scaffold_1101_7

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(7672..8232)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit id=1794403 bin=GWE2_Bacteroidetes_42_39 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 373
  • Evalue 1.80e-100
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 373
  • Evalue 2.50e-100
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 193.0
  • Bit_score: 121
  • Evalue 3.40e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGGGAAAAGTGAAAACATACAGTTCGTATTGAATGACGTGGGCTCCTATGGCAAATTTTTCACTGAGAATTATCACACTGCCTGTTTGGTAGCCAGCCGATATCTTCACGATAATCAGGAAATTGAAGACATCGTTCAGGAGGTATTTGTAAAAATATGGGAAAAACGAAAGGCGATAAAAATTCAAAGTAACCTTAAAAATTACCTGTTTAATTCAGTTAAAAACACCTGTATAAATCATGTGCAGCGCAAAAAGGAAATAATCGCCGGATTCGATCAGGCCGGTTTGCAGCAGTGGGAAAACGAAGCAGGGGATCAGTTTATTTCCGAAGAATTTGCTTCAAAAATCAACCAGGCCATCGAAACATTGCCTCCGCAGTGTAAAAAGATTTTTCTTCTGGCTTTTGTCGACGATCTGAGTTACCAGGAAACTGCCGATGCACTCGGGCTTTCGAAAAATACAGTTAAAACCCAGATGGGAATTGCATACAAACTACTCAGGGAAAAGCTCCGCGATTCATTCTTCAGCTTGGTTCTGATCTTTTTCAGAAAAGCATAA
PROTEIN sequence
Length: 187
MGKSENIQFVLNDVGSYGKFFTENYHTACLVASRYLHDNQEIEDIVQEVFVKIWEKRKAIKIQSNLKNYLFNSVKNTCINHVQRKKEIIAGFDQAGLQQWENEAGDQFISEEFASKINQAIETLPPQCKKIFLLAFVDDLSYQETADALGLSKNTVKTQMGIAYKLLREKLRDSFFSLVLIFFRKA*