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GWA2_Bacteroidetes_42_15_gwa2_scaffold_3890_17

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(17439..18017)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=1926447 bin=GWE2_Bacteroidetes_42_39 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 193.0
  • Bit_score: 384
  • Evalue 4.60e-104
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 384
  • Evalue 6.50e-104
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 177.0
  • Bit_score: 130
  • Evalue 5.80e-28

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGGATGACAAACAACTGATAGCAAAAATACTTGAACAGAACGATCATGCGTTTGGTATTCTTGTTGAAAAATACAAGAAGCTGGTTTATTGTGCCATTTTTCGGTTGGTACGTGATACAACCGATGCCGAAGATATTTTTCAGGATGTTTTTCTCGAAGTTTACCGTTCGATCCATCACCTGCGCAACGAGGATGATTTATCGGCTTGGCTGTTTAAAATCTCATACAACAAAGCAATAAGTTTTCTCCGGAAGAAAAACCCGGCCCGGGCAAACGACCTATTGGAGAAAAGCAGGTTGCCTGAATCCGGGAATCATGCCATTTCGTTTATTGACCATCAAACTCCGGCCTGGAAAATGGAAGAGCAGGAGGCCGGGTTTGTGCTTTATACGGCAATCGACCGTTTGCCGGAAATGCAAAAAAAAGCATTGCTGATGCACAAATTCGAAGATTATTCGCACAAGGAAATCGGTGAAATGATGCAACTCTCTGTTGCCTCCGTCGAATCGCTGATTTACAGGGCGAAAGTCAGCTTGCGAAAATCACTGTATTCGTACTTTAAAAAACATTTAAAATAA
PROTEIN sequence
Length: 193
MDDKQLIAKILEQNDHAFGILVEKYKKLVYCAIFRLVRDTTDAEDIFQDVFLEVYRSIHHLRNEDDLSAWLFKISYNKAISFLRKKNPARANDLLEKSRLPESGNHAISFIDHQTPAWKMEEQEAGFVLYTAIDRLPEMQKKALLMHKFEDYSHKEIGEMMQLSVASVESLIYRAKVSLRKSLYSYFKKHLK*