ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

gwa2_scaffold_525_3

Organism: zPERA2_38_36

near complete RP 47 / 55 MC: 8 BSCG 46 / 51 ASCG 8 / 38
Location: 1417..2346

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions Tax=zPERA2_38_36 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 309.0
  • Bit_score: 582
  • Evalue 3.40e-163
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26) iprscan interpro
DB: TMHMM
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0
seg (db=Seg db_id=seg from=102 to=111) iprscan interpro
DB: Seg
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

zPERA2_38_36 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGAAAAAACTATTAGCAACATCAGCATTAATCTTCATGTTTATGATCCCATTGTTTGGGATTTCAATTGCGCATGCGCAAACTCCATCTGCCGGATTGGGTGCGGTTGGGGACGTTTTGAAAGGCAAAAATGCCGGAACGCAAAACGAAATTTTGCACGCTGAATCTTCAACCGAAGATGGCGCAAGCGAGATTACAAGCACAATCCTTTACCTTGCTGATTACATCAAATATTTTGTAGGTGGAATCGCGGTTATCATGATTATTTACGCTGGTGCAAGGCTTATAATCGCAGGCAAAGATTCGGAAAAAGAGGCGGAAGCTTCCAAAAAAACAATATTTTACGCAATACTATCGATAATTATAATTATCCTTGCGGATACTCTTGTAAGAAAAGTATTTTTTGGAGAATATGGCGAAGCATTTAGAAATCAGGGAAGTGCAGAATTTTTCGCACAAGAAGGTGCGGAACAGATTCGCGGACTTTATAACTTTGCCGAGTATTTTGTTGGAGCAATTGCAATTTTAACGATCATCATAAATGGCGTAAGAATTGCAATGAGCTTTGGGGACGAAGATGGCAAGAAAAAAGCAATTCAAAGAATTTTATGGTCATTCGCAGGGTTAATACTTGTTGGAGTTTCCGAATTTGTTGTCAAAGACATTCTCTTTCCACAAATAGGAACTAAACTTCCTGCAATTGACAAAGCAACAACTTTGCTTAAAGGCATGACTAATTTCGCGTCAGCGTTCATCGCAACAGCAGCATTTGTTATGCTTCTTTACTCGGGATATATGTACGTTATTGGAGGCGCTGATCCGGATAGTGCCGGAAAAGCCAAAAAAGCTCTTGCAGCGGCGATCATTGGACTTGTCTTAGCAGCAGGATCGTATGCTATAGTCAACACTGTATTTAGTATAAGTAATTAA
PROTEIN sequence
Length: 310
MKKLLATSALIFMFMIPLFGISIAHAQTPSAGLGAVGDVLKGKNAGTQNEILHAESSTEDGASEITSTILYLADYIKYFVGGIAVIMIIYAGARLIIAGKDSEKEAEASKKTIFYAILSIIIIILADTLVRKVFFGEYGEAFRNQGSAEFFAQEGAEQIRGLYNFAEYFVGAIAILTIIINGVRIAMSFGDEDGKKKAIQRILWSFAGLILVGVSEFVVKDILFPQIGTKLPAIDKATTLLKGMTNFASAFIATAAFVMLLYSGYMYVIGGADPDSAGKAKKALAAAIIGLVLAAGSYAIVNTVFSISN*