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gwa2_scaffold_1782_32

Organism: GW2011_AR3

partial RP 35 / 55 MC: 9 BSCG 14 / 51 ASCG 18 / 38 MC: 1
Location: comp(28684..29409)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation protein SDO1 homolog n=8 Tax=Thermococcaceae RepID=SDO1_PYRAB similarity UNIREF
DB: UNIREF90
  • Identity: 50.0
  • Coverage: 0.0
  • Bit_score: 243
  • Evalue 8.00e+00
Ribosome maturation protein SDO1 {ECO:0000313|EMBL:KHO45874.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 480
  • Evalue 1.90e-132
RNA-associated protein similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 225.0
  • Bit_score: 244
  • Evalue 3.40e-62

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Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 726
ATGAGCGGAAGCGGATATTCATTCGACAGGGAAAAAATCCACCTTAATGTGGCAAGAATGAAAGTGGGGAAGGATGTCTTTGAAGTTGTTATCGACCCGGATTTAGCCCTGGAGCTGCGAAGCGGAAAAAGTGTGAGCATGCATGATGTCCTGAAAGATGAAATGGTCTTCACTGAAGCCAGGAAAGGGCTGCGGGCATCCGAGCACAAAATGCAGGAAGTTTTTGGAACCAGCGAGCCATTGGAAGTGGCAAGGACCATAATCATGAAAGGCGAGGTGCAGGAAACTACAGAGCACAGGGCAAAGCTGGTGGACGAGAAAAAGAGGAAGATCATCGGAATTATCCACAGGAATGCTGTGGACCCGAGAAACCACATCCCCCATCCAATTGACAGGATTGAAAGAGCCATGGAAGAGGCCAAGGTGCGGATAGACACAAGGCGGGGCGCGGAAGAGCAGGTTGAGGAAGTCCTTAACCAAATCAGGCCTATCCTTCCAATAAAATTCGAGACAAAGCAAATCCAGATCCGGATCCCCTCGCAATACGGGGCAAAATGCTATTCAGTTGTCAAGGGCTTTGGGAAGATGCTGAAGGACCAGTGGCTTTCTGACGGGTCATGGCTTGCTGTTGTGGAGATTCCAGGAGGGCTTGAGCCGGATTTGTATGACAAGCTGAATGCCATGACGCATGGCAATGTGGAAACAGAGGTAATTGGCACAAAATAG
PROTEIN sequence
Length: 242
MSGSGYSFDREKIHLNVARMKVGKDVFEVVIDPDLALELRSGKSVSMHDVLKDEMVFTEARKGLRASEHKMQEVFGTSEPLEVARTIIMKGEVQETTEHRAKLVDEKKRKIIGIIHRNAVDPRNHIPHPIDRIERAMEEAKVRIDTRRGAEEQVEEVLNQIRPILPIKFETKQIQIRIPSQYGAKCYSVVKGFGKMLKDQWLSDGSWLAVVEIPGGLEPDLYDKLNAMTHGNVETEVIGTK*