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gwa2_scaffold_2305_20

Organism: GWA2_OP11_39_19

near complete RP 41 / 55 BSCG 45 / 51 MC: 1 ASCG 8 / 38
Location: comp(21232..21780)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 364
  • Evalue 8.60e-98
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 182.0
  • Bit_score: 121
  • Evalue 3.30e-25
RNA polymerase sigma-70 factor, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 122
  • Evalue 1.00e+00

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Taxonomy

R_RIF_OP11_01_40_20 → RIF-OP11-1 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 549
ATGGCAACAAACCACCTCCAATCGCTAGTTCAAAACGCCAAGTTGGGGCATGTAGATTCTTTCGGCAAAATTTATGATTTATTAGTAGATAGAATTTATCGCTTTATATATTTTAGAGTTGACACCAAAGAAGAAACCGAGGATTTAACTGAAGAAGTCTTTTACAAAGTTTACCAAAAAATCCAGGATTACTGCGATGAAGGACTCCCGTTTGAGGCTTGGATATTTAGGATTGCTAGAAACCAAATAATTGATTATTACAGAACCAAAAAGGACCTGAGCTCTTTTGATGATAAAATAGAGATTGAAGACACTGGCCCGACGCCTGAAGAATACACTGTAAAATCAATTTTACAAGAAGAAGTGTTGAGGGCGGTTAAGAAGCTACCTGATTCTTATCAAGAATTGATCATACTAAAGTTTATTGAAGGTAAAGATAACGATGAGATAGGGGGAATTATAAATAAACCAGAAGCACATGTGCGAGTACTTCAAAGTCGCAGCCTAAAAGCACTTAAAAAAGTCTTAGAAAAAGACAAAAAAATATGA
PROTEIN sequence
Length: 183
MATNHLQSLVQNAKLGHVDSFGKIYDLLVDRIYRFIYFRVDTKEETEDLTEEVFYKVYQKIQDYCDEGLPFEAWIFRIARNQIIDYYRTKKDLSSFDDKIEIEDTGPTPEEYTVKSILQEEVLRAVKKLPDSYQELIILKFIEGKDNDEIGGIINKPEAHVRVLQSRSLKALKKVLEKDKKI*