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gwa2_scaffold_917_9

Organism: GWA2_OD1-rel_42_14

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 11 / 38
Location: comp(6232..6951)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator TrmB Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 465
  • Evalue 4.70e-128
iclR helix-turn-helix domain protein KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 246.0
  • Bit_score: 102
  • Evalue 1.20e-19
Transcriptional regulator, TrmB similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 113
  • Evalue 8.00e+00

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Taxonomy

RLO_RIF_OD1_13_41_11 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAAAAAAACATCATTTTTACAACCCTTCGGCCTTGACAAAAAAACAGAGCTTGTTTATAGAGCCCTGCTTTCTCTTGCCGACGCTTCGGTAAGCACCATTGCCCGAAGGGCCGGAATTAAACGAACCAGCGCTTACCACATTCTTGAAAACCTCGCGGCTATGGGATTGGTCACCACTTATATTGAACGCGGAGTAAGGCGTTTTGTGGCCGAGCATCCCTCGCGCTTAAAAACCTTTTTTGAACGCCAAGTAATTATGGCCGAGCGGATTATTCCCGAATTAACAAAAGAAATTTCTAAATCCCGTCTTGCTCCGTCCATTCGTGTTTTTGAAGGAAAAGACGCGATAAAAAGTATGAGCGAAGAAGGGCTTAAGACCAAAGAAAAAATTATTCTTTCCATCGGTTCAGCCAAGCACCTTACGGAATTGTTGGGGGGTAAATACGGTTGGGGCAAACGCCGCCGCGAAGCAGGAATTTTCCAAAAAGCGCTTCGTTTTGCAAACGACGACATAATTGATTCTCCTTCGCGGCTTCACGATGTACGATTACTGCCCGATTCGTTCATTTTTCCCGGCTACATTATTATTTTTGACAATTCTGTCGGCATTATCCCATGTGAAGAACCCGCCCGAGGCATCCTTATCACCAGCCGAAATTTTTCCATCATGATGAAATCTTTTTTTGAAGTGTTGTGGAAAGTTAGTTCAGATGTTTAA
PROTEIN sequence
Length: 240
MKKTSFLQPFGLDKKTELVYRALLSLADASVSTIARRAGIKRTSAYHILENLAAMGLVTTYIERGVRRFVAEHPSRLKTFFERQVIMAERIIPELTKEISKSRLAPSIRVFEGKDAIKSMSEEGLKTKEKIILSIGSAKHLTELLGGKYGWGKRRREAGIFQKALRFANDDIIDSPSRLHDVRLLPDSFIFPGYIIIFDNSVGIIPCEEPARGILITSRNFSIMMKSFFEVLWKVSSDV*