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gwa2_scaffold_1144_33

Organism: GW2011_AR16

partial RP 24 / 55 MC: 2 BSCG 13 / 51 ASCG 14 / 38
Location: 25258..26097

Top 3 Functional Annotations

Value Algorithm Source
NMD3-related protein (Nonsense mediated mRNA decay) n=3 Tax=Methanobrevibacter smithii RepID=A5UKI9_METS3 similarity UNIREF
DB: UNIREF90
  • Identity: 25.0
  • Coverage: 0.0
  • Bit_score: 110
  • Evalue 9.00e+00
Nonsense-mediated mRNA decay protein 3 {ECO:0000313|EMBL:KHO51433.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 564
  • Evalue 1.10e-157
NMD3-related protein (nonsense mediated mRNA decay) similarity KEGG
DB: KEGG
  • Identity: 25.7
  • Coverage: 296.0
  • Bit_score: 110
  • Evalue 6.90e-22

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Taxonomy

archaeon GW2011_AR16 → Archaea

Sequences

DNA sequence
Length: 840
ATGAAAACGAGGGAGGAGCTTTTGAAGAAACTCGTGCTGAAGAACATCACGTTTGAAGAACAGATTCAGAAAAAGGATGTGGAAATCAAGGTGCATATGGCGCCTGCTGAAAAAGATTGCAGTGTGCAGATCACCGTCAAAAGACCGCGGCAGGATGAGCAGTATCAAATCCCTTTCAAAATATATTTTACGGTGTGTCCGCACTGCGGCATCGAAAAAACGCAGTACTTTGAGGGGATTTTGCAGATACGAGACCCCAACGATGAAGTCATGCAATTTGTTGACAAGGTGTTCGAACAGGCAAAAAAACGAGGAGTCTATATCAACAAGAAAGTTCCCGCCAAACAAGGTTTTGATTATTATGTGACTTCGCAAACTTTCCTCTCAACGATGGGGAATAAACTGCAAGAGCGCTTTGGAGGAACCCTCAAGATCAGCTCCCAGCTCTTCACGCAGAACAAACTCACCAGCAAACAGCTGTATCGCGTCAATGTATATTTCAAAGCACCGCCGTTTAAGAGAGGAGATGTCATTAACCACCAGGGTAAGCTTTTGAAAGTTACCCAACTCGGCAAACTGGTCAATTGTTTTGATATCATCAATGAGAAAAAGACAGCATTTAGGTATAACCTTGATGAACGGAGTCTGCATCATCAGGAGCTGATCATCCTGCCAAGAGAAAAAACAACCATTGCAAAAGTCTATCCGCATGTTGAAGTGCTTGATGCAGACTACCAGCCGGTCAAGATTGCAAATCAAGCAGTGGGGGAAAAAAAGAAATATGAAACAGGAGAAAAAATAGAGATTGTGCGATGGAAGCACAAAGTTTTTCTGGTTTAA
PROTEIN sequence
Length: 280
MKTREELLKKLVLKNITFEEQIQKKDVEIKVHMAPAEKDCSVQITVKRPRQDEQYQIPFKIYFTVCPHCGIEKTQYFEGILQIRDPNDEVMQFVDKVFEQAKKRGVYINKKVPAKQGFDYYVTSQTFLSTMGNKLQERFGGTLKISSQLFTQNKLTSKQLYRVNVYFKAPPFKRGDVINHQGKLLKVTQLGKLVNCFDIINEKKTAFRYNLDERSLHHQELIILPREKTTIAKVYPHVEVLDADYQPVKIANQAVGEKKKYETGEKIEIVRWKHKVFLV*