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gwa2_scaffold_5868_7

Organism: GWA2_OD1_44_9

near complete RP 42 / 55 MC: 1 BSCG 46 / 51 ASCG 10 / 38
Location: 8012..9217

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 401.0
  • Bit_score: 772
  • Evalue 3.90e-220
RNA polymerase sigma-70 subunit RpoD KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 365.0
  • Bit_score: 398
  • Evalue 3.10e-108
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 397
  • Evalue 3.00e+00

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Taxonomy

R_OD1_Yanofskybacteria_44_24 → Yanofskybacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCTAAGAAGAAAAAGTCTTCTAAAAAAAGCGCGTCCAAACAGGCTTCTAAAAAGAGGAGCCGCGTTAAGTTAAAAAAACACAGGAAGTTGGCCAAGCCCAAGAAGCCGGGTGCTAAAAAATCTAAGGCTCCGATCAGCGAGAGCGCCATTGAGGCGCTTATGGAAAAGGGCAAGCATCGAGGGTTCGTTACCCAAGCGGAAATTATAAATTCCGTCCCTAATATCGAGAAAGATATTGTCGGCCTTGAAAGACTTTATGATCGTCTTGAATCGGCCAACATCAATATCATAGAGTCGGGGAGAGTATTTGAGGAAGAAAAAGCCCGCAAATATCAAGTCGAAAAAAAATTAGAAGAAGAGCTCGAAGAGGGTTCATCGGCCGATTCGGTTCAGATGTATTTGCGCGAGATCGGAAGATATCCTCTTCTGTCCAGTGAGGAAGAGGTCGAGTTGGCCAAAAGAATAGAAAAAAATGATGAATCTGCCCGCCAGAAATTGGCGGTCTCAAACTTAAGATTAGTGGTTTCAATAGCAAAAAAGTACGTCGGCCGATCGGCCAATCTTACCCTTCTCGATCTGATACAGGAGGGTAACATCGGCTTATTTAAGGCAGTCGAAAAATTTGATTATAAAAGAGGCTATAAATTCTCAACCTATGCCACTTGGTGGATCAGGCAAGCCATTACCAGAGCATTGGCAGATCAGGGCAAAACCATCCGCATTCCGGTGCATATGGTGGAAACTATCAATAAATATCAGCAGGTGGTCCGAAGATTGGTTCAGGATTTAGGCAGAGAGCCTTTGCCGGAAGAGGTGGCTTCGGAAATGGGCGTAGAGGTGGACAAGATAAGGTATATCCAGAAAATTTCTCAAGACACCGTTTCTCTTGAGGCGCCCGTCGGTCAGGATGATGAAGACAGCAATTTAGAAAGCTTTATACCCGACGAGGACTCCATTACCCCGTCTGTTTCTACGGCCAGGAAGATTTTAAAAACACATCTTCAGGAGATAATAAACGATCTTACTCCGCGCGAACAGAAAATTCTTGACATGCGATTCGGCCTGACTGACGGAGTTACCCATACCCTTGAAGAAGTGGGGAAGGTCTTCTCTGTTACCCGTGAAAGGATCAGGCAGATCGAAGCCAAGGCTCTTGAAAAAATACGCCAGCATCACAAAGTCGAGAAATTAAAAGGTTATTAA
PROTEIN sequence
Length: 402
MPKKKKSSKKSASKQASKKRSRVKLKKHRKLAKPKKPGAKKSKAPISESAIEALMEKGKHRGFVTQAEIINSVPNIEKDIVGLERLYDRLESANINIIESGRVFEEEKARKYQVEKKLEEELEEGSSADSVQMYLREIGRYPLLSSEEEVELAKRIEKNDESARQKLAVSNLRLVVSIAKKYVGRSANLTLLDLIQEGNIGLFKAVEKFDYKRGYKFSTYATWWIRQAITRALADQGKTIRIPVHMVETINKYQQVVRRLVQDLGREPLPEEVASEMGVEVDKIRYIQKISQDTVSLEAPVGQDDEDSNLESFIPDEDSITPSVSTARKILKTHLQEIINDLTPREQKILDMRFGLTDGVTHTLEEVGKVFSVTRERIRQIEAKALEKIRQHHKVEKLKGY*