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GWB1_Spirochaete_62_6_GWB1_scaffold_1085_41

Organism: Treponema sp. GWB1_62_6

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(40598..41089)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKV6_TREBD similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 152.0
  • Bit_score: 97
  • Evalue 1.30e-17
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC1_Treponema_61_84_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 315
  • Evalue 4.10e-83
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 152.0
  • Bit_score: 97
  • Evalue 3.50e-18

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Taxonomy

GWC1_Treponema_61_84_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGGGAACGGATCGAGGAGCTGTACGTGGCACACGGGCCGATGGCGTACCGGCGCTGCCTTTCCGTCCTGCGGGACGAAGAAGCGGCCTACGACGCGTTGCAGGAGGTCTTCGTGAAGCTGATGGACTCGCCGTTCGTTCTCGCGCGGATGCGGGACCCGGCTGCCTACCTGTACCGCGCCGCGACGAACGCCGCGCTGAACCAGCTGAGGCGCGACCGGAGGCGGCTCCGGGTGGCGATAGACGCGGTCGCGGAGCCCGCCGACGCCCGCTCCCTCGATGCCGAAGACGCGCTCGCGGCGGCGATGTTGCTTGAACTGCTGGCGGACGGCGTGGGCGCGCGGACGCGGGAAATCGCGTACTGCCGCTACGCGGACGGATTGGGGCTGCAGGAGATCGCCGAGCGGGTCGGGCTCTCCTTTTCCGCCGTCCGCAAACACCTGGACGCGTTCAAGGCGCACGCCCGGCGCCGGAAGGAGAAGATCGCATGA
PROTEIN sequence
Length: 164
MRERIEELYVAHGPMAYRRCLSVLRDEEAAYDALQEVFVKLMDSPFVLARMRDPAAYLYRAATNAALNQLRRDRRRLRVAIDAVAEPADARSLDAEDALAAAMLLELLADGVGARTREIAYCRYADGLGLQEIAERVGLSFSAVRKHLDAFKAHARRRKEKIA*