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gwc1_scaffold_3393_2

Organism: GWC1_OD1_43_61

near complete RP 41 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: 1102..2304

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKR85714.1}; TaxID=1618626 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWF1_41_10.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 400.0
  • Bit_score: 771
  • Evalue 6.70e-220
RpoD family RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 401.0
  • Bit_score: 388
  • Evalue 1.90e-105
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 392
  • Evalue 1.00e+00

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Taxonomy

GWF1_OD1_41_10 → Azambacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGAAAGTAAAAAGTAAAATAAAATTTGTCAAAAAGGCCAAGCTTAAAAAGAAGGCCGCGCCTAAGAAAAAGAATTTGCCGAAGAAAAAAACAAAATCGGCGCCGAAAATCGGCAAAAAAGAGCGACTTTTTGAAGAACGGGTCAAAACCATTATTAATCGCGGCCGCGAAAGAGGATTTATCACCGAGACGGAAATTCTGAAATTTTTTCCGGATGTGGAAAAAGATATTTCCGAATTGGAAATTCTTTACGATCGCTTAGAAGAAGCGGATATAAAAGTTGAAGAAACGCGCGAGTTTATAGAAGAGCCGGTTCCCGCGCCGAGCGAGGAGGAAATAAACAAGGCGCTTAATATCGAGGCCGATGAGACAATTGGCTTCGATTCGGTACAGATGTATCTGCGGGAAATCGGCAGAACGCCTCTGCTGACCAGCGACGAAGAAAAAGAATTGGCTAAAAAAATAGAAAAAGGGGATGTGGAGGCGCGCAACAAACTGATTCAATCGAATTTGCGGCTGGTGGTTTCCATCGCCAAGCGATATATCGGCCGCAGTCCCAATTTGACGCTTTTGGATTTGATTCAGGAGGGAAATATCGGTTTGGCGCGGGCGGTAGACAAATTCGATTATCGCCGCGGTTTTAAATTTTCCACTTACGCCACCTGGTGGATTCGGCAGGCGATCACCAGAGCGCTGGCCGACCAGTCGCGCACCATTCGGATTCCGGTGCATATGGTGGAAACGATTTCCAAATACACCCAGATGAAGCGGCGCTTGTTCCAGGATTTGGGGCGCGAACCCTTGCCGGAGGAAGTGGCGTCCGAAATGGGTATTGATGTTGAAAAAGTCCGCCATATCATTAAAATTTCCCAGGACACGATTTCTTTTGAAGCGCCGGTGGGCGACGACGACGACGATTCTTCGTTGGGGGATTTCATTGAAGACGAAAAGGGCGTGACACCCATTCAATCGGCATCATTGCGGCTTTTGGGCGATCAGATTAAAGAAATTATCAACGACCTCCAGCCGCGGGAGCAAAAAATTTTGCGAATGAGATTCGGTCTGGATGACGGTGTGGCGCATACATTGGAAGAGGTTGGCAATGAATTCGGCGTCACCCGCGAGCGCATTCGCCAAATCGAATTCAAAGCGCTGGAAAAAATCCGCCAGCACGGCAATTTGAAAAAACTTGAAGGATATTAA
PROTEIN sequence
Length: 401
MKVKSKIKFVKKAKLKKKAAPKKKNLPKKKTKSAPKIGKKERLFEERVKTIINRGRERGFITETEILKFFPDVEKDISELEILYDRLEEADIKVEETREFIEEPVPAPSEEEINKALNIEADETIGFDSVQMYLREIGRTPLLTSDEEKELAKKIEKGDVEARNKLIQSNLRLVVSIAKRYIGRSPNLTLLDLIQEGNIGLARAVDKFDYRRGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYTQMKRRLFQDLGREPLPEEVASEMGIDVEKVRHIIKISQDTISFEAPVGDDDDDSSLGDFIEDEKGVTPIQSASLRLLGDQIKEIINDLQPREQKILRMRFGLDDGVAHTLEEVGNEFGVTRERIRQIEFKALEKIRQHGNLKKLEGY*