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gwc1_scaffold_55_49

Organism: GWC1_OD1_36_108

near complete RP 45 / 55 MC: 2 BSCG 49 / 51 ASCG 10 / 38
Location: comp(45872..46075)

Top 3 Functional Annotations

Value Algorithm Source
Probable cold shock protein scoF n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQQ8_9PLAN alias=ACD1_706.36870.84G0027,ACD1_706.36870.84_27,ACD1_C00017G00027 id=16797 tax=ACD1 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
  • Identity: 89.4
  • Coverage: null
  • Bit_score: 124
  • Evalue 1.60e-26
Cold shock-like protein {ECO:0000313|EMBL:KKQ39866.1}; TaxID=1618697 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_73.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 4.80e-30
cold-shock DNA-binding protein family KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 66.0
  • Bit_score: 74
  • Evalue 1.00e-11

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Taxonomy

GWC2_OD1_37_73 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGAACCAAGGAACAATCAAACGTTTGACAGACCGAGGATTCGGATTCATTTCTCAAGAAGGAAGTGATAAGGATCTTTTCTTTCATGCAAAAGAACTTCAGAATGCTGAATTCAACGAATTGCAAGAAGGTGACAAGGTTGAGTTCGAAGTAAGCGAAAGCCCAAAAGGACCAAACGCAATCAACGTTTCAAAAATCAACTAA
PROTEIN sequence
Length: 68
MNQGTIKRLTDRGFGFISQEGSDKDLFFHAKELQNAEFNELQEGDKVEFEVSESPKGPNAINVSKIN*