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gwc1_scaffold_8080_12

Organism: GWC1_OP11_39_12

partial RP 30 / 55 BSCG 36 / 51 MC: 2 ASCG 5 / 38
Location: comp(5711..6046)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKW00612.1}; TaxID=1618355 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_48_9.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 218
  • Evalue 6.00e-54
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 111.0
  • Bit_score: 158
  • Evalue 1.50e-36
gyc:GYMC61_0157 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor alias=RAAC19_AAC14_scaffold_1006_12,RAAC19_C00011G00012 id=699509 tax=RAAC19 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown similarity UNIREF
DB: UNIREF90
  • Identity: 73.2
  • Coverage: null
  • Bit_score: 170
  • Evalue 3.30e-40

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Taxonomy

GWA1_OP11_48_9 → Amesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 336
CAAGATACCACATCTTTGGAGACGCCGGTGGGAGACGAAGATGACTCAATGCTCGGAGATTTTATAGCCGATACGTCACAACCAACACCGATTGAGGCGGCTTCCAGAGAGCTACTTAAGGAGAATATTGAGGAAGTATTATCTTCACTTACTGACAGGGAGGCAAGAGTGCTGCGGATGCGGTTTGGGCTGGACAGCCGGAATCCGATGACACTGGAGGAGGTGGGGCGGGAGTTCGGGGTGACCCGGGAGCGGATCAGGCAGATTGAAGCTAAAGCGTTGAGGAAGCTGAAGCATCCGAGTAGGAGAAAGAAATTACAGGATTATTTGGATTAA
PROTEIN sequence
Length: 112
QDTTSLETPVGDEDDSMLGDFIADTSQPTPIEAASRELLKENIEEVLSSLTDREARVLRMRFGLDSRNPMTLEEVGREFGVTRERIRQIEAKALRKLKHPSRRKKLQDYLD*