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gwc2_scaffold_18769_5

Organism: GWC2_WS6_36_7

near complete RP 40 / 55 BSCG 43 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1737..2816)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKQ11178.1}; TaxID=1619094 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWE1_36_69.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 359.0
  • Bit_score: 693
  • Evalue 2.10e-196
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 361.0
  • Bit_score: 391
  • Evalue 2.60e-106
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 389
  • Evalue 7.00e+00

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Taxonomy

GWE1_WS6_36_69 → WS6 → Bacteria

Sequences

DNA sequence
Length: 1080
ATGACAGACAAAGAGAAAGCTGTTAAAGTCTTAATTGACAAAGGTAAAGATCAAGGGTTTCTAACCCAAGAAGATTTGCTAGACGTATTTCCTACCATTGAAGAAGATGTTGATCTTCTCGATGATATTTTTGCCTCATTACAAGAAAATGAGATAGAAGTATTAGAACCAGAAGAGAATGTTGAGGTTCCTGAGAAGGAAGAACTAACTCTTGAGAAGAAAATTCATATTCTCAAAACTATTCAATCAAGTCTTTCAACAGATGCGATTAGATCATATCTCTATGAAATTGGCAGAATCCCTCTTTTGACAGGTGAAGAAGAGAGAATATTGGCACAAAGAATTGAAAAGGGAGACGAAGAAGCTACGCAGCTATTAATCACTGCAAATCTTAGACTAGTCGTTAGTATTGCAAAGAAATATAGTAAGAGTGGGCTTGAGCTTCTCGATTTAATCCAAGAAGGAAACATTGGTTTAATGAGAGCCGTTGAGAAATTTGACTATACCAAGGGTTTCAAATTTTCTACTTATGCTACATGGTGGATTAGACAAGCTATTACCAGAGCCATAGCAGATCAAGCTAGAACTATTCGTGTACCAGTACACATGATTGAAACCATAAACAAGTTTAACAAAGTAAATAACTCCTTAACTACAAGATTGGGAAGACCTCCTAAAGATGAGGAAATTGCAAAAGAAATGGATATCGAATTAGAGAAAGTTGCTGAAATTAGAAAGATCAAACAAAATCCTACATCACTATCTACACCAATAGGTGAGGAGAAGGATAGTAAACTTCAAGATGTAATCGCAGATGATTGGTCACAATCTCCAGAAGAATTTGCGACCTCTGAATATCTTAAGAATCAATTGAAGGATATCCTGGACACCCTGCAAGACCGAGAAAGAAGGGTTCTATCCCTAAGGTTTGGTCTAGACGATGGTGTTTCAAGAACTTTAGAAGAAGTTGGAAAAGAATTTGGAGTAACTAGAGAAAGAATCAGACAAATAGAAGCAAAAGCTTTGAAAAAGCTCAAAGAGAAATCTACGCAGCAAAAGCTTGATGACTATATTGACTAA
PROTEIN sequence
Length: 360
MTDKEKAVKVLIDKGKDQGFLTQEDLLDVFPTIEEDVDLLDDIFASLQENEIEVLEPEENVEVPEKEELTLEKKIHILKTIQSSLSTDAIRSYLYEIGRIPLLTGEEERILAQRIEKGDEEATQLLITANLRLVVSIAKKYSKSGLELLDLIQEGNIGLMRAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRVPVHMIETINKFNKVNNSLTTRLGRPPKDEEIAKEMDIELEKVAEIRKIKQNPTSLSTPIGEEKDSKLQDVIADDWSQSPEEFATSEYLKNQLKDILDTLQDRERRVLSLRFGLDDGVSRTLEEVGKEFGVTRERIRQIEAKALKKLKEKSTQQKLDDYID*