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gwc2_scaffold_19300_6

Organism: GWC2_WS6_36_7

near complete RP 40 / 55 BSCG 43 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(4269..4832)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKQ11186.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 373
  • Evalue 1.90e-100
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 181.0
  • Bit_score: 162
  • Evalue 1.30e-37
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 172
  • Evalue 9.00e+00

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Taxonomy

GWC2_WS6_36_7 → WS6 → Bacteria

Sequences

DNA sequence
Length: 564
ATGAAAAGAAGTCCCACCAAGGAAAAAACAGACTACGAAATAGTTCTCCAGATCTTAGAGAATGTAGATGATTACAAATACCTCATTGAAAGATATGAAAAAAAGCTTTTCATATATATACAAAGAATCCTATATGTAAATAAGGAAGATACAGAAGACATACTTCAGGAAGTATTCATAAAAGCATATAGAAATCTAAACAGCTATGATCCCAAATATAACTTCTCAAGTTGGATATACAGAATTACACACAATGAAGCAATATCATTTCTAAGAGCTAACAAAAAACGACAGTTAGATATATCAAATGATATGGAAAACAATATATTTGATACAATAGCATCAGATATAGATATTGAGAAAGAAGCCATAAAAGATTGGGATTCTAAAAAAGTTCACGAAGTACTTGCTAAACTAGATGAGAAATACAGAGAAGTATTAGTATTAAAATATATAGAAGAAAAAGACTATAATGAGATCTCAGACATACTTCAAGTTCCATCAGGTACCGTAGGATCATTGATAAATAGAGCAAAGGATAAGTTTAAAAAATTAGTAAAATAA
PROTEIN sequence
Length: 188
MKRSPTKEKTDYEIVLQILENVDDYKYLIERYEKKLFIYIQRILYVNKEDTEDILQEVFIKAYRNLNSYDPKYNFSSWIYRITHNEAISFLRANKKRQLDISNDMENNIFDTIASDIDIEKEAIKDWDSKKVHEVLAKLDEKYREVLVLKYIEEKDYNEISDILQVPSGTVGSLINRAKDKFKKLVK*