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GWC2_OD1-i_37_82

GWC2_Parcubacteria_37_83
In projects: GWC2  |  cpr-genomes  |  CPR-complete-draft  |  rifle_organic_carbon  |  cpr-dpann-all  |  ggdb  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Parcubacteria  →  Bacteria

Metagenomic Context

Parent: GWC2 Unbinned

Properties

Avg. coverage: 82.82 Longest contig: 43.41 Kbp Bin length: 825.78 Kbp GC content: 37.27 %
Contigs count: 48 Features count: 828 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Displaying 48 items
contig # features sequence size GC content (%) Cov Coding Density (%)
gwc2_scaffold_2135 GWC2_OD1-i_37_82_7
Species: GWC1_OD1_38_22 (51.06%)
47 33544 bp 36.96 84.90 85.47
gwc2_scaffold_8092 GWC2_OD1-i_37_82_3
Species: GWC1_OD1_38_22 (52.17%)
46 38657 bp 36.45 90.54 84.42
gwc2_scaffold_3335 GWC2_OD1-i_37_82_6
Species: GWC1_OD1_38_22 (54.55%)
44 36104 bp 37.79 81.26 81.27
gwc2_scaffold_666 GWC2_OD1-i_37_82_2
Species: GWC1_OD1_38_22 (52.38%)
42 43406 bp 37.17 84.37 82.30
gwc2_scaffold_1438 GWC2_OD1-i_37_82_4
Species: GWC1_OD1_38_22 (69.44%)
36 37947 bp 37.77 87.68 82.31
gwc2_scaffold_4688 GWC2_OD1-i_37_82_5
Species: GWC1_OD1_38_22 (55.56%)
35 37078 bp 37.76 85.48 79.42
gwc2_scaffold_1608 GWC2_OD1-i_37_82_9
Species: GWC1_OD1_38_22 (80%)
30 31843 bp 36.91 81.69 83.82
gwc2_scaffold_2054 GWC2_OD1-i_37_82_11
Species: GWD2_OD1_38_7 (65.52%)
29 28324 bp 36.42 88.62 90.04
gwc2_scaffold_2324 GWC2_OD1-i_37_82_15
Class: Moranbacteria (51.85%)
27 23086 bp 35.76 96.92 76.66
gwc2_scaffold_2102 GWC2_OD1-i_37_82_13
Species: GWD2_OD1_38_7 (70.37%)
27 23810 bp 39.84 89.18 84.09
gwc2_scaffold_1785 GWC2_OD1-i_37_82_12
Species: GWC1_OD1_38_22 (61.54%)
26 26633 bp 33.30 70.37 96.23
gwc2_scaffold_3293 GWC2_OD1-i_37_82_16
Class: Moranbacteria (61.54%)
26 22659 bp 37.98 79.89 83.58
gwc2_scaffold_3003 GWC2_OD1-i_37_82_10
Species: GWC1_OD1_38_22 (56%)
25 31088 bp 38.99 83.86 90.33
gwc2_scaffold_3862 GWC2_OD1-i_37_82_8
Species: GWC2_OD1-i_37_82 (52%)
25 33013 bp 37.47 83.93 86.20
gwc2_scaffold_6213 GWC2_OD1-i_37_82_17
Species: GWC1_OD1_38_22 (54.17%)
24 22480 bp 36.31 87.02 87.25
gwc2_scaffold_2321 GWC2_OD1-i_37_82_14
Species: GWC1_OD1_38_22 (66.67%)
21 23541 bp 34.88 68.19 87.08
gwc2_scaffold_9905 GWC2_OD1-i_37_82_19
Class: Moranbacteria (65%)
20 20173 bp 37.80 82.37 85.58
gwc2_scaffold_7480 GWC2_OD1-i_37_82_21
Class: Moranbacteria (63.16%)
19 18076 bp 37.38 76.68 79.35
gwc2_scaffold_6431 GWC2_OD1-i_37_82_20
Species: GWC2_OD1-i_37_82 (50%)
18 18158 bp 37.84 71.90 81.04
gwc2_scaffold_5061 GWC2_OD1-i_37_82_23
Species: GWC1_OD1_38_22 (50%)
18 14232 bp 37.06 84.99 85.39
gwc2_scaffold_3827 GWC2_OD1-i_37_82_22
Species: GWC1_OD1_38_22 (50%)
18 17597 bp 38.40 84.18 87.20
gwc2_scaffold_3662 GWC2_OD1-i_37_82_18
Species: GWC1_OD1_38_22 (50%)
16 20689 bp 36.28 82.65 83.87
gwc2_scaffold_26965 GWC2_OD1-i_37_82_29
Class: Moranbacteria (53.85%)
13 12036 bp 38.04 80.32 80.08
gwc2_scaffold_5487 GWC2_OD1-i_37_82_25
Species: GWD2_OD1_38_7 (50%)
12 13558 bp 41.27 79.93 86.92
gwc2_scaffold_5434 GWC2_OD1-i_37_82_24
Class: Moranbacteria (58.33%)
12 13630 bp 36.24 90.94 90.81
gwc2_scaffold_64346 GWC2_OD1-i_37_82_36
Species: GWC1_OD1_38_22 (54.55%)
11 8598 bp 38.35 66.12 60.61
gwc2_scaffold_16757 GWC2_OD1-i_37_82_35
Species: GWD2_OD1_38_7 (54.55%)
11 8987 bp 38.26 78.61 72.81
gwc2_scaffold_11148 GWC2_OD1-i_37_82_30
Class: Moranbacteria (63.64%)
11 11148 bp 38.54 79.24 85.25
gwc2_scaffold_8221 GWC2_OD1-i_37_82_31
Species: GWC1_OD1_38_22 (80%)
10 10580 bp 35.99 84.81 89.89
gwc2_scaffold_6441 GWC2_OD1-i_37_82_28
Species: GWC1_OD1_38_22 (50%)
10 12307 bp 37.65 83.03 83.42
gwc2_scaffold_8405 GWC2_OD1-i_37_82_32
Species: GWC1_OD1_38_22 (60%)
10 10413 bp 36.82 83.25 79.63
gwc2_scaffold_7184 GWC2_OD1-i_37_82_26
Species: GWD2_OD1_38_7 (55.56%)
9 12753 bp 35.48 85.19 75.28
gwc2_scaffold_15126 GWC2_OD1-i_37_82_37
Species: GWC1_OD1_38_22 (55.56%)
9 7526 bp 37.36 82.08 83.63
gwc2_scaffold_30418 GWC2_OD1-i_37_82_49
Species: GWD2_OD1_38_7 (55.56%)
9 5050 bp 35.80 85.87 71.58
gwc2_scaffold_6309 GWC2_OD1-i_37_82_27
Species: GWC1_OD1_38_22 (66.67%)
9 12458 bp 39.19 81.27 85.44
gwc2_scaffold_10408 GWC2_OD1-i_37_82_34
Species: GWC1_OD1_38_22 (77.78%)
9 9087 bp 38.05 84.80 78.18
gwc2_scaffold_16685 GWC2_OD1-i_37_82_41
Species: GWD2_OD1_38_7 (50%)
8 6752 bp 37.34 84.11 86.51
gwc2_scaffold_14927 GWC2_OD1-i_37_82_38
Species: GWC1_OD1_38_22 (71.43%)
7 7253 bp 39.40 81.98 69.45
gwc2_scaffold_24176 GWC2_OD1-i_37_82_44
Species: GWC1_OD1_38_22 (57.14%)
7 5306 bp 35.47 87.04 80.57
gwc2_scaffold_15216 GWC2_OD1-i_37_82_39
Species: GWC1_OD1_38_22 (50%)
6 7171 bp 35.99 88.46 90.62
gwc2_scaffold_28592 GWC2_OD1-i_37_82_47
Species: GWC2_OD1-i_37_82 (50%)
6 5151 bp 36.83 81.89 94.64
gwc2_scaffold_25871 GWC2_OD1-i_37_82_43
Species: GWC2_OD1-i_37_82 (60%)
5 5460 bp 36.81 85.27 94.45
gwc2_scaffold_31340 GWC2_OD1-i_37_82_45
Species: GWC2_OD1-i_37_82 (80%)
5 5293 bp 39.03 74.56 92.90
gwc2_scaffold_35690 GWC2_OD1-i_37_82_40
Species: GWC2_OD1-i_37_82 (80%)
5 6871 bp 36.36 66.39 92.43
gwc2_scaffold_25883 GWC2_OD1-i_37_82_48
Species: GWC1_OD1_38_22 (75%)
4 5070 bp 34.69 65.71 88.11
gwc2_scaffold_23618 GWC2_OD1-i_37_82_33
Species: GWC2_OD1-i_37_82 (100%)
4 9960 bp 40.17 70.65 95.03
gwc2_scaffold_38237 GWC2_OD1-i_37_82_42
Species: GWD2_OD1_38_7 (75%)
4 5985 bp 37.23 79.42 89.07
gwc2_scaffold_24688 GWC2_OD1-i_37_82_46
Species: GWC1_OD1_38_22 (66.67%)
3 5234 bp 38.06 83.48 91.99
Displaying 48 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.